Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00179 ATGATGGTGGATTTGGGTCCGTTCTCAAATGAGAACTTTGATCCGAAGAAATGGATCAACTCGGCGTGTCAGAGTCGCCACCCACAGGAATCGTTGGATAAGCACCTCGTCGATTTGGAGATGAAGCTCCAAATGGTTTCCGAGGAAATCGCCGCATCTCTCGAGGAGCAGAGCGCCGCCGCTCTCCTCCGCGTCCCCCGCGCCACTCGCGACGTCATCCGTCTCCGCGACGATGCCGTTTCTCTCCGTTCCGCTGTCTCCGGCATCCTCCAGAAGCTCAAGAAGGCAGAGGGATCATCGGCTGAATCTATAGCAGCTCTTGCTAAAGTCGATGTTGTCAAGCAGAGGATGGAAGCTGCTTATGAAACTTTGCAGGATGCTGCTGGATTAACTCAATTAAGTTCGACTGTGGAGGATGTATTTGCCAGTGGTGATCTCCCTCGTGCTGCGGAAACTTTGGCTAACATGAGGCATTGCTTGTCTGCTGTTGGGGAGGTTGCTGAATTTGCCAACATAAGAAAGCAACTTGAAGTCTTGGAGGATAGGCTAGACACGATGGTGCAGCCTCGTCTTACACATGCATTATCCAATCGCAAGGTTGGAGATGCTCAAGATTTGCGGGGAATTCTTATGAGAATTGGAAGGTTTAAGTCTCTGGAATCACAATATATAAAGGTTCATTTGAAACCAATAATGCAGCTTTGGGAAGATTTTGATTCAAGAGAACGAGCTAATAAGCCTGCAAATGAGAAGAATGAAATGGAGAGGACATCAAGTGGTGGCGATTTTCAATCAGTTTCACGTTCAATATCATTCTTCAGTTGGTTACCAAACTTCTATGATGAGCTACTACTCTATCTTGAACAAGAATGGAAATGGTGTATGATTGCTTTTCCTGAAGATTATAAAACTCTTGTCCCAAGGCTACTAAGTGAGACTATGGTGGCTATACATGCCAGTTTCATATCTCATATCAACCTTGCCATTGGAGATGCTGTTCCAGAAACAAAAGCACTGGCTAAAGGTTTATTAGATATTTTATCTGGAGATATGCAAAAGGGTATTAAGATTCAGACAATGCATCTGGAGGCCTTGATTGAATTACACAATATGACGGGGACCTTTGCAAGGAATATTCAGCACTTATTTTCTGGTTCTGATGTACGGGTGTTAATGGATGTGCTGAAAGCTGTGTACTTGCCATATGAATCATTTAAACAGAGGTATGGACAAATGGAGCGTGCCATCCTTTCCTCTGAGATTGCTGGAGTAGATTTAAGAGGAGCTGTAATTCGAGGGGTGGGAGCCCAAGGAGTTGAACTCAGTGAAACAGTTCGCAGGATGGAGGAGTCTATTCCCCGAGTTATTATACTTCTTGAAGCAGCTGCAGAGAGATGCATCAGCTTCACTGGAGGTTCTGAGGCAGATGAGCTAATTCTTGCCCTTGATGACATAATGTTACAATACATTTCCACTCTGCAAGAAACCCTCAAGTCACTAAGAACTGTCTGTGGTGTGGATTATGGTGGTGATGGTACTGTAAAGAAGGAGTTGGAGAAGAAGGATGGAAACCAAAATGCTCGGAGAGTTGATTTGAGCTCTAATGAGGAGGAATGGTCCATGGTCCAAGGGGCATTGCAGATCCTTACAGTTGCAGATAGTTTGACAAGCAGATCTTCCGTCTTTGAAGCATCTTTAAGAGCTACTCTTGCTAGATTGAGCACAACTCTATCTTTTGGTTCAAGTTTAGACCAAAACCAGACTATAAATGGTAATGAAGATGGGGAGCCGTCTTTTGGTGGAAGGGCTGCCTTGGATATGGCAACAGTGCGGCTGGTTGATGTGCCTGAGAAGGCCAGGAAACTCTCTCAACTTTTGGATCAGTCTAAGGATCCCCGATTTCATGCACTTCCCCTTGCATCTCAAAGAGTTGCTGCATTTTCAGACACGGTGAATGAACTTGTATATGATGTCCTCATATCTAAAGTAAGGCAACGCCTCAGTGATGTAGCCCATTTGCCGATTTGGTCATCTGTTGAGGAAGCAAGTGCTTTTCCTCTCCCTACCTTCAGTGCATATCCACAATCCTATGTGACCAGTGTTGGTGAATATCTTCTCACTTTACCCCAACAATTGGAGCCACTTGCTGAGGGAATCTCTAACAGTGAAACCAATGATGAAGCACAGTTCTTTGCAACTGAATGGATGTTCAAGGTTGCAGAGGGTGCAACAGCACTTTACATAGAGCAGTTACGTGGGATTCACTACATTTCAGATCGTGGAGCACAGCAGCTATCAGTTGATATTGAGTATCTTAGTAATGTGCTTTCCGCTCTGTCAATGCCTATCCCTCCAGTTCTGGCAACATTCCAAAGTTGTCTTTCTACATCAAGAGACCAGCTAAAAGATATTTTGAAGACAGATTCAGCAAACCAACTTGATCTGCCAACAGCAAACCTTGTGTGTAAGATGCGGCGAGTGAATTTAGATTCATGA 2496 0.4463 MMVDLGPFSNENFDPKKWINSACQSRHPQESLDKHLVDLEMKLQMVSEEIAASLEEQSAAALLRVPRATRDVIRLRDDAVSLRSAVSGILQKLKKAEGSSAESIAALAKVDVVKQRMEAAYETLQDAAGLTQLSSTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVLEDRLDTMVQPRLTHALSNRKVGDAQDLRGILMRIGRFKSLESQYIKVHLKPIMQLWEDFDSRERANKPANEKNEMERTSSGGDFQSVSRSISFFSWLPNFYDELLLYLEQEWKWCMIAFPEDYKTLVPRLLSETMVAIHASFISHINLAIGDAVPETKALAKGLLDILSGDMQKGIKIQTMHLEALIELHNMTGTFARNIQHLFSGSDVRVLMDVLKAVYLPYESFKQRYGQMERAILSSEIAGVDLRGAVIRGVGAQGVELSETVRRMEESIPRVIILLEAAAERCISFTGGSEADELILALDDIMLQYISTLQETLKSLRTVCGVDYGGDGTVKKELEKKDGNQNARRVDLSSNEEEWSMVQGALQILTVADSLTSRSSVFEASLRATLARLSTTLSFGSSLDQNQTINGNEDGEPSFGGRAALDMATVRLVDVPEKARKLSQLLDQSKDPRFHALPLASQRVAAFSDTVNELVYDVLISKVRQRLSDVAHLPIWSSVEEASAFPLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEGISNSETNDEAQFFATEWMFKVAEGATALYIEQLRGIHYISDRGAQQLSVDIEYLSNVLSALSMPIPPVLATFQSCLSTSRDQLKDILKTDSANQLDLPTANLVCKMRRVNLDS* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00179 831 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 3 827 IPR019335 GO:0006886|GO:0017119
Rops3g00179 831 Pfam Golgi complex component 7 (COG7) 4 826 IPR019335 GO:0006886|GO:0017119
Rops3g00179 831 Coils Coil 36 56 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00179 K20294 - gmx:100794449 1454.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00179 3 2415972 2422074 Rops3g00179 3 2415972 2422074 ECH