Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00178 ATGGACGCTCAGAGAGCTCTTCTCGACGAACTCATGGGTGCAGCTCGGAACTTGACGGAGGAAGAGAGAAAGGGTTATAAGGAAGTGAATTGGGACGATAAGGAAGTGTGTGGATTCTACATGGTTCGCTTTTGCCCTCACGATCTCTTCGTTAACACTCGCAGTGATCTCGGACCTTGCCCAAAAATACATGACCAGAAGTTGAAAGAAAGTTTTGAGAAATCCCCAAGACATGATGCATATGTACCCAAATTTGAAGCTGAACTTGCTCAGTTTTGTGAGAAATTGGTGATGGACTTGGATAGAAGAGTAAGACGTGGACGAGAACGTCTTGCTCAAGAGGTGGAGCCAGCACCACCACCACCACTAACAGCTGAAAAGTCTGAACAGCTGTCTGTGCTGGAGGAGAAAATAAAGAACCTTCTGGAACAGGTTGAATCTCTCGGTGAAGCTGGGAAGGTTGATGAAGCTGAAGCTCTTATGAGAAAGGTGGAGACACTTAATACTGAGAAGACATCCTTAACACAACCTCAAAATGATAAGGTGTTAATGCTCGCTCAGGAGAAGAAAATGGCACTCTGTGAGATATGTGGTTCTTTTCTTGTGGCAAATGATGCTGCAGAAAGGACTCAGTCTCATGTCACAGGGAAGCAGCATGTTGGCTATGGCATGGTTCGCGACTTCATAAACGAGCACAAAGCCGCTAAGGAGAAGGCTAATGAAGAAGAAAGATTAGCTCGGGAAAGAGAGGCAGAAGAGCGAAGGAAACGGAGGGAGAAGGAGCCTGAGAGGAGACGAAGTGATTCAAGTGATAGGGAGAGACGTCGTGATAAAGATCGTGATAGAGAGAGAGATAGGTATAGAGATAGAGACTCAGATCGTGATAGGTCTCGGGAGCATGATGTTAGAGGCAATCGAGACAGTGGAAGGGGGATGGATTCTAGGTCGAGGAATGGAAGAAATGGAGGCAGAGACAGGTACCGTGATCGGAGCAGATGTCAGAATTTGAATTTTGAAAGAGCTTTTGAGACTATACAATCTTCCTTTCGTCAATATTATTAA 1062 0.4548 MDAQRALLDELMGAARNLTEEERKGYKEVNWDDKEVCGFYMVRFCPHDLFVNTRSDLGPCPKIHDQKLKESFEKSPRHDAYVPKFEAELAQFCEKLVMDLDRRVRRGRERLAQEVEPAPPPPLTAEKSEQLSVLEEKIKNLLEQVESLGEAGKVDEAEALMRKVETLNTEKTSLTQPQNDKVLMLAQEKKMALCEICGSFLVANDAAERTQSHVTGKQHVGYGMVRDFINEHKAAKEKANEEERLAREREAEERRKRREKEPERRRSDSSDRERRRDKDRDRERDRYRDRDSDRDRSREHDVRGNRDSGRGMDSRSRNGRNGGRDRYRDRSRCQNLNFERAFETIQSSFRQYY* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00178 353 MobiDBLite consensus disorder prediction 234 332 - -
Rops3g00178 353 Pfam LUC7 N_terminus 2 249 IPR004882 GO:0003729|GO:0005685|GO:0006376
Rops3g00178 353 PANTHER RNA-BINDING PROTEIN LUC7-RELATED 1 332 IPR004882 GO:0003729|GO:0005685|GO:0006376
Rops3g00178 353 Coils Coil 1 21 - -
Rops3g00178 353 Coils Coil 225 256 - -
Rops3g00178 353 Coils Coil 124 151 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00178 - - gmx:100792348 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00178 3 2409841 2413438 Rops3g00178 3 2409841 2413438 ECH