Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00177 ATGAATGACACAGTGGACAAATTGGTCATCTTTCTAGCAAAGAGAGATGGTATTGACAAGCTTGTGAAGACCTTCCAATATGTCTCCAAGCTTGTAAACTGGCATGTGGATGCCACTCAACCAGACTTGGCAAAGAGGTTCAAGCAATGGGAAGTGGCTTCAGGCCTTAGCAGAAAAGCTTTCAGAACTGGCAGGTTTCTAACTGGATTCAATGTTCTCAGGAGAAATCCAGGTTCTACCCTTACTCTAAGGCTACTTGCAGTGCTTGCTAATGCAGGGGAAATGGTCTATTTCTTCTTTGACCACTTTCTTTGGTTGGCAAGAATTGGAATCTTGGATGCACACTTAGCAAAGAAGATGAGCTTCATATCTGCTTTTGGTGAGTCTGTGGGCTATATTTTCTTCATAATAGCTGATTTTATTTGGTTGAATGAGGGGTTCAAAGAAGAGAGGAAGCTGAAAAGCAACAAGGAAAGATCAGGAGAAGAAGAGAAAAGGATTCAGAAGATAAGAGGTGATAGAATAATGAGGCTAATGGCAGTGGCAGCTAATGTTGCAGATTTGATCATAGCACTAGCTGAAATTGAGCCAAACCCATTCTGTAACCACACTGTTTCACTTGGCATTAGTGGGTTGGTTTCTGCTTGGGCTGTTTCCTCACTTGGCTTCCTTCCTATATTTCCGAGATCAACGACAACAACGCAGATGGAAGAAAGTAAGCAATCGCGTTACGTGAAGCTGACTAAAGATCAGGCGCCTCCGGAAGAAGATATTGTCCCTGGTGAACTCAATCAACCAATTGAGGTTCCTCAGTTGGCTGTTCGCAAGTGCTCGGAATGTCGACAGCCACTACCTGAAAGCTATGCACCTCCTGCAGATGAACCTTGGACGACTGGGATCTTTGGATGTGCAGAAGACAGGGAAAGTTGCTTGACAGGACTGTTTTGTCCTTGTGTATTATTTGGGCGCAATATAGAGAGGTTGAGGGAAGACACTCCTTGGACTGGGCCATGCATTTGTCATGCCATTTTTGTTGAAGGTGGCATTTCTGTGGCAATAGGAACCGTAATTGCGAGTTCCATCGTTTCTGGTATTGATCCAGGGACATTATGTCTCATTTGGGAGGGTTTATTTTTTACATGGTGGATGTGTGGCATTCACACTGGTCAAGTTCGGCAATCCTTACAGAAGAAATATCACTTGAAGGATTCACCATGTAATGCATGTTGTGTGCACTGCTGCTTGCACTGGTGTGCCTTGTGTCAGGAGCACAGGGAGATGAAGGGACGGCTCTCGGACAATATTTTCTCAGAAATGACCGTTGTAAACCCTCCTCCCACTCAAGAGATGAAGTCTACTGATGACAAGGAAAATCCTGAAACATCTTCGGCTAACAACAATGAGCATACTGATTTGGAGATGCAGGCTATATAA 1434 0.4414 MNDTVDKLVIFLAKRDGIDKLVKTFQYVSKLVNWHVDATQPDLAKRFKQWEVASGLSRKAFRTGRFLTGFNVLRRNPGSTLTLRLLAVLANAGEMVYFFFDHFLWLARIGILDAHLAKKMSFISAFGESVGYIFFIIADFIWLNEGFKEERKLKSNKERSGEEEKRIQKIRGDRIMRLMAVAANVADLIIALAEIEPNPFCNHTVSLGISGLVSAWAVSSLGFLPIFPRSTTTTQMEESKQSRYVKLTKDQAPPEEDIVPGELNQPIEVPQLAVRKCSECRQPLPESYAPPADEPWTTGIFGCAEDRESCLTGLFCPCVLFGRNIERLREDTPWTGPCICHAIFVEGGISVAIGTVIASSIVSGIDPGTLCLIWEGLFFTWWMCGIHTGQVRQSLQKKYHLKDSPCNACCVHCCLHWCALCQEHREMKGRLSDNIFSEMTVVNPPPTQEMKSTDDKENPETSSANNNEHTDLEMQAI* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00177 477 PANTHER PEROXISOMAL BIOGENESIS FACTOR 11 2 218 - -
Rops3g00177 477 Pfam Peroxisomal biogenesis factor 11 (PEX11) 5 217 IPR008733 GO:0005778|GO:0016559
Rops3g00177 477 NCBIfam uncharacterized Cys-rich domain 295 428 IPR006461 -
Rops3g00177 477 MobiDBLite consensus disorder prediction 463 477 - -
Rops3g00177 477 MobiDBLite consensus disorder prediction 442 477 - -
Rops3g00177 477 Pfam PLAC8 family 296 426 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00177 Rops-Chr3 2400027 2405670 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00177 - - gmx:100499924 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00177 3 2400027 2405670 Rops3g00177 3 2400027 2405670 ECH