Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00173 ATGGCGCTTAAAACCCTATCCACTTTCCTCACTCCTCTTTCCCTCCCTAACTCCAACTTTCTCCAATTTCGTGCCAAAACTTCCCTCATTATCTGCGAATTCCAACGGCCTCAGAAATCGCCCGTAGAATCTGAAGGCACCGGCGCAGCTGCTCCCTCGCCAGGTGAGAAGTTTCTCGAACGCCAGCAGTCATTTGAGGCCGCTAAGCTCATCCTCAAACAGAACAAAAATAATAAAAAGAAAGAGAAACCGTTGAAAGCTTCTAATTCCGTCGCTTCTTGCTATGGCTGTGGTGCTCCGTTACAAACTTCCGATACCGATGCGCCTGGTTATGTTGATCCTCAAACCTACGAATTGAAAAAGAAACATCACCAGCTTAGAACCGTTCTGTGTAGACGGTGCCGGCTTTTGTCTCATGGCAAGATGATAACTGCTGTTGGAGGACATGGAGGTTACTCTGGCGGCAAACAATTTGTTACGGCCGAAGAGCTCCGAGAAAAGTTGTCTCATCTGCGTCACGTCAAAGCTCTAATTGTCAAATTGGTTGATATTGTTGACTTCAATGGCAGTTTCTTGTCTCGAGTGCGAGATCTTGCTGGTGCTAATCCGATAATATTGGTGGTGACCAAGGTTGATCTCCTTCCAAGAGATACTGATCTTAATTGTGTGGGGGATTGGGTTGTAGAAGCTACCACCAGAAAGAAGCTGAATGTTCTCAGTGTCCATCTGACCAGTTCAAAATCATTGGTGGGAGTAACTGGAGTGATATCAGAAATCCAGAAAGAAAAGAAGGGAAGAGATGTTTACATTCTGGGTTCAGCTAATGTTGGGAAATCTGCTTTCATCAATGCTTTGCTAAAAACAATGGCTATAAATGATCCAGTGGCTGCAGCTGCTCAAAGATACAAACCAATACAATCTGCCGTTCCTGGAACTACCTTAGGGCCAATTCAAATTAATGCTTTTTTAGGAGGAGGGAAACTTTATGACACTCCTGGAGTTCATCTCCACCATAGGCAAACTGCAGTTGTTCATTCTGAAGATCTACCATCTCTTGCTCCTCAAAGCCGACTGAAGGCCCGATCTTTTCCAAATTCTCAAGTATTTCCAGACAATGTAGAGGAAGGCGCTAATGGCTTGAATGCATTTTCGATTTTTTGGGGTGGTCTTGTTAGAATTGATGTCTTGAAGGTTCTACCAGAAACACGTTTGACATTTTATGGGCCCAATAGGCTACCGATTCATATGGTGCCCACAGAGAAAGCAGATGAATTTTATCAGAAAGAACTTGGAGTTCTGCTAATCCCTCCAAGTGGAAGAGAAAAGGCTGAGAACTGGAGAGGACTTGACTCAGAACGTAAATTGCAAATAAAATTCGAAGATGCCGAAAGGCCAGCTTGTGATATCGCTATATCAGGTCTAGGATGGATTACTGTTGAGCCAGTTAGTAGGTCAATCAAATTATCACAACCAAAACCAATAGAGACTGCTGGGGAATTGCTTCTGACCGTGCACGTCCCCAAGCCTGTTGAGGTCTTTGTGAGGCCATCAATACCAGTAGGCAAGGCTGGAGCAGAGTGGTACCAGTATAGAGAATTAACAGATAAAGAACAGGAAATGAGACCAAAATGGTACTTTTGA 1641 0.4412 MALKTLSTFLTPLSLPNSNFLQFRAKTSLIICEFQRPQKSPVESEGTGAAAPSPGEKFLERQQSFEAAKLILKQNKNNKKKEKPLKASNSVASCYGCGAPLQTSDTDAPGYVDPQTYELKKKHHQLRTVLCRRCRLLSHGKMITAVGGHGGYSGGKQFVTAEELREKLSHLRHVKALIVKLVDIVDFNGSFLSRVRDLAGANPIILVVTKVDLLPRDTDLNCVGDWVVEATTRKKLNVLSVHLTSSKSLVGVTGVISEIQKEKKGRDVYILGSANVGKSAFINALLKTMAINDPVAAAAQRYKPIQSAVPGTTLGPIQINAFLGGGKLYDTPGVHLHHRQTAVVHSEDLPSLAPQSRLKARSFPNSQVFPDNVEEGANGLNAFSIFWGGLVRIDVLKVLPETRLTFYGPNRLPIHMVPTEKADEFYQKELGVLLIPPSGREKAENWRGLDSERKLQIKFEDAERPACDIAISGLGWITVEPVSRSIKLSQPKPIETAGELLLTVHVPKPVEVFVRPSIPVGKAGAEWYQYRELTDKEQEMRPKWYF* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00173 546 PANTHER NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL 36 546 IPR044229 GO:0003924
Rops3g00173 546 Pfam 50S ribosome-binding GTPase 268 337 IPR006073 GO:0005525
Rops3g00173 546 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 161 337 IPR030378 GO:0005525
Rops3g00173 546 Gene3D - 162 338 IPR027417 -
Rops3g00173 546 CDD YqeH 131 334 - -
Rops3g00173 546 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 338 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00173 Rops-Chr3 2359658 2365603 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00173 K13427 - gmx:100781340 896.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00173 3 2359658 2365603 Rops3g00173 3 2359658 2365603 ECH