Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00158 ATGACGAGTGACCCGAATCATTCAGACGTGAAGCTAAACAATCTATCACCTCAAAATGTTACAGAAATCATACAAAGATCTGCAAATTATAAACCCAACATTTGGAAATACAACTTTCTGCAGTCACTTGGCAGTATATATGATGATGAAGAATTTGGTATGCAGTTACACAAGCGGGTAATTGAAGTAAAGGATCGTTTTGTTCAAGAGGTGGGTGTTCTGCAAAAATTAGAGTTGGTTGATTGGATCCAAAAACTAGGCCTTGCCAACCAGTTTCAGAAGGAAATCAATGAGTTTCTCGAAACTATATTTGTCTCTTTTAAAAACGGCAAGAATCCCAGTATACAAGAGAATTTGCATGTATCTGCATTATGCTTCAGGCTTCTAAGGCAGCATGGATACAATGTTTGTCCCGATATACTAGGAAACTTCTTAGATGATATGGTGATGAGGAAAAGCTCATTTGCTGGTGATGCTAAAGATATTATGGAGCTTCTTGAGGCCTCACACTTGAGCTTAGAAGGAGAAAATAACTTGGATGAGGCCAAAAACTTTGCAACAAATTGGCTCAAGGATGCTTTCAAACCTTGTTCCATCAATATCAACGACCATTATTCTAACATATTTGTTGAAAGAGTGGTCCATGCCTTGGAGATTCCATCCCGTTGGAGAGTGCCGTGGTTTGACACCAAGTGGCACGTGAAGCAATACCAAAAGGAGAAACATATGGACCCTGTTTTACTTGAATTGGCCAAATTAAACTTCAATATAATTCAGGCAAAACTTCAAAAGGAGGTCCAGGAATTGTCCAGGTGGTGGGAGAATCTTGGCATAAAAAAGGACTTGAGCTTTGCAAGAAATAGGTTGGTTGAAAGCTTCATGTGTGCAGCAGGAGTTGCCTTTGAGCCCAAGTATAAATCCGTTAGGAAATGGCTCACTAAAGTGATTATTTTCGTATTAGTGATTGATGATGTTTATGATATACACGCCGCATTTGAAGAATTGAAGCCGTTCACAAGGGCATTTGATAGATGGGATGCCAAAGAACTTGAAGAATTTCCAGATTACATGAGGATTTGTTTCCATGCACTTAAAGATGTCACAAATGAAATTGCTTATGAAATTGCCGGAGAAAAGAACTTTAATATAGTGTTACCTTACCTAAAGAAAGCGTGGATAGACTTTTTCAAAGCATTATACGAGGAAGCAAAATGGTACAAAATGGGATATATTCCATCGCTGCAAGAATATTTAAGCAACGCTTGGATTTCATCTTCGGGGCCAGTAATTCTACTCCATTCATATTTTGCTACAATGCATGAAGTGACGGATGAGATAGACGATTTTCTACACACATATGAAGATTTGATCTTCAATGTATCTCTTGTAATTCGACTGTGCAATGATTTAGGGACCACGGTGGCTGAAAGAGAAAGGGGTGATGCTGCTTCATCAATCGTATGCTATATGAATGAAATGGACGTTTCAGAGGGAGAAGCAAGAAAGCATATCCAAAACATCATAACGAATGCGTGGAAAAAGATAAATGGGCACTGCACCACTAGAGTTGCTTCCGTGGAACCGTTTCTTACTCAAGCCATAAATGCTGCTCGTGTGGCCCATACCCTTTATCTAAATGGCGATGGGTTTGGGATCCAGGACCGTGATATCAAAAAACATATATTATCTCTAGTTGTTGAACCCCTGTAA 1710 0.3918 MTSDPNHSDVKLNNLSPQNVTEIIQRSANYKPNIWKYNFLQSLGSIYDDEEFGMQLHKRVIEVKDRFVQEVGVLQKLELVDWIQKLGLANQFQKEINEFLETIFVSFKNGKNPSIQENLHVSALCFRLLRQHGYNVCPDILGNFLDDMVMRKSSFAGDAKDIMELLEASHLSLEGENNLDEAKNFATNWLKDAFKPCSININDHYSNIFVERVVHALEIPSRWRVPWFDTKWHVKQYQKEKHMDPVLLELAKLNFNIIQAKLQKEVQELSRWWENLGIKKDLSFARNRLVESFMCAAGVAFEPKYKSVRKWLTKVIIFVLVIDDVYDIHAAFEELKPFTRAFDRWDAKELEEFPDYMRICFHALKDVTNEIAYEIAGEKNFNIVLPYLKKAWIDFFKALYEEAKWYKMGYIPSLQEYLSNAWISSSGPVILLHSYFATMHEVTDEIDDFLHTYEDLIFNVSLVIRLCNDLGTTVAERERGDAASSIVCYMNEMDVSEGEARKHIQNIITNAWKKINGHCTTRVASVEPFLTQAINAARVAHTLYLNGDGFGIQDRDIKKHILSLVVEPL* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00158 569 Gene3D - 71 243 IPR036965 GO:0010333|GO:0016829
Rops3g00158 569 PANTHER OS04G0344100 PROTEIN-RELATED 23 549 - -
Rops3g00158 569 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 31 242 IPR008930 -
Rops3g00158 569 Gene3D Farnesyl Diphosphate Synthase 32 559 IPR008949 -
Rops3g00158 569 Pfam Terpene synthase family, metal binding domain 248 514 IPR005630 GO:0000287|GO:0010333|GO:0016829
Rops3g00158 569 Pfam Terpene synthase, N-terminal domain 35 217 IPR001906 GO:0010333|GO:0016829
Rops3g00158 569 SUPERFAMILY Terpenoid synthases 243 569 IPR008949 -
Rops3g00158 569 CDD Terpene_cyclase_plant_C1 26 568 IPR044814 GO:0010333|GO:0016102
Rops3g00158 569 SFLD Terpene Cyclase Like 1 C Terminal Domain 244 568 IPR034741 -
Rops3g00158 569 FunFam Isoprene synthase, chloroplastic 227 559 - -
Rops3g00158 569 SFLD Isoprenoid Synthase Type I 244 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00158 Rops-Chr3 2080706 2083830 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00158 K14173 - gmx:100812119 865.914