Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00155 ATGGGTTTGATCACCGAATCGAGTCTCTTGCTTCCTTCGGGTTCAGGGAAGAAGAAAGTTCCTCAAGATAAATGGAACTTAGCATACATAATATATTTCACTCTTGGCCTCGGTTACCTTCTTCCATGGAACGCTTTCATCACAGCCGTTGATTACTTCTCTTACCTTTACCCTGATGCCTCCGTTGACCGCATCTTCGCCGTTGTTTACATGCTCGTCGGTCTCTTTGGTCTCTCCCTCATCATCCTCTGTAGTCACAAATCCAATGCCTATGTTCGAATCAACGTGGGTCTTGCCTTGTTCGTTGTTTCCCTCCTCGTTGTTCCTCTTCTCGATGTTTTTTATGTTAAGGGTCGGGTCGGGTTGTATGATGGGTTTTATGTAACGGCTGGGGCGGTTGGGCTTTCCGGTGTGGCTGATGCTTTGGTTCAGGGCTCCATTGTTGGCTCCGCCGGTGAGTTGCCGGAGAGGTATATGCAAGCTGTCGTCGCCGGCACTGCTGCTTCTGGGGTACTTGTTTCTGTCCTGAGGATATTTACAAAAGCTGTTTACACACAAGATGCCTCTGGCCTGCAAAAGAGTGCAAATCTCTACTTTGCTGTATCAATTGTAATTATGTTCATATGCATGGTGCTCTACAACATAGTGCACAAACTTCCTGTTATGAAGCACTATAATGAACTTAAGATTCAGGCTGTCACTACGGATGAAGACAATGGTCCACTTACTGGTTCTGTCTGGCGGTCAACTGTATGGGATACTGTGGGAAGAGTCAAGTGGTATGGGTTTGGCATAGTGCTAATTTATGTTGTGACTCTAGCAATATTTCCAGGTTACATTACAGAGGATGTGCACTCTCAACTTCTGAAGGATTGGTATCCAATTCTGCTTATTACTTGCTATAATGTGTTTGATCTTGTTGGCAAGTGCCTGACTGCAGTATACATGCTAGAGAATGCAAAAGTTGCGATAGTTAGTTGCATAGCAAGGTTGTTGTTTTTCCCTCTCTTCTTAGGGTGCTTGCATGGTCCCAAATTCTTCCGGACTGAGATTCCTGTGATAATACTGACTTGCCTGTTAGGGCTGACAAATGGCTACTTGACCAGTGTATTGATGATATTGGCTCCTAAAATTGTAAAGTTGCAGCATGCGGAGACTGCAGGCATTGTGTGTGTGTTATTCTTAGTTATTGGTCTGGCTGCTGGGTCTATTATAGCTTGGTTTTGGGTCATCTGA 1236 0.4482 MGLITESSLLLPSGSGKKKVPQDKWNLAYIIYFTLGLGYLLPWNAFITAVDYFSYLYPDASVDRIFAVVYMLVGLFGLSLIILCSHKSNAYVRINVGLALFVVSLLVVPLLDVFYVKGRVGLYDGFYVTAGAVGLSGVADALVQGSIVGSAGELPERYMQAVVAGTAASGVLVSVLRIFTKAVYTQDASGLQKSANLYFAVSIVIMFICMVLYNIVHKLPVMKHYNELKIQAVTTDEDNGPLTGSVWRSTVWDTVGRVKWYGFGIVLIYVVTLAIFPGYITEDVHSQLLKDWYPILLITCYNVFDLVGKCLTAVYMLENAKVAIVSCIARLLFFPLFLGCLHGPKFFRTEIPVIILTCLLGLTNGYLTSVLMILAPKIVKLQHAETAGIVCVLFLVIGLAAGSIIAWFWVI* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00155 411 PIRSF ENT 5 411 IPR002259 GO:0005337|GO:0016020|GO:1901642
Rops3g00155 411 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 18 409 IPR002259 GO:0005337|GO:0016020|GO:1901642
Rops3g00155 411 Pfam Nucleoside transporter 132 410 IPR002259 GO:0005337|GO:0016020|GO:1901642
Rops3g00155 411 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 350 366 IPR002259 GO:0005337|GO:0016020|GO:1901642
Rops3g00155 411 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 369 385 IPR002259 GO:0005337|GO:0016020|GO:1901642
Rops3g00155 411 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 131 151 IPR002259 GO:0005337|GO:0016020|GO:1901642
Rops3g00155 411 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 387 411 IPR002259 GO:0005337|GO:0016020|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00155 Rops-Chr3 2040260 2042546 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00155 6 411 Organic Solute Cotransporters AT1G70330 70.244 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00155 K15014 - gmx:100793043 702.205