Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00149 ATGAGAATGCTATCTAGGACATTTCGCTCTATCAAATCCCCAATTCCAAACCCAAAATTATCCAAATCGTCATCTCCTGCAAAATCAGAAGTGAAATTCAACGCCAAATCGAAATCAGAGTCATGGTGTGTTTATCTCATTCTCTCCACCAACCATCCAATCAAAACCTACGTTGGGGTCACAACCAATTTCCCTCGCCGTTTGAAGCAGCATAATGGTGAACTTAAAGGCGGTGCAAAAGCATCCCGTGCTGGAAGGCCATGGATTTGTGCATGCCTCATTTGTGGTTTTACAGACCGAAGTGAAGCTTGCGTGTTTGAATCAAAATGGAAAGCTTTCTCAAGGAGAGTTCCCCGTAAAAATCAAAATGACAATCTCTCCAAGCAAAGTGAAGATCCATCACGTCCCCTATTGCAACACAGGCAAGCAGCTTTAAATAAAGTGAAAAGCTCTCTTGACTGCAGTCACTTAGAAATTAACTGGCATTTGGACCCATTGTGA 501 0.4251 MRMLSRTFRSIKSPIPNPKLSKSSSPAKSEVKFNAKSKSESWCVYLILSTNHPIKTYVGVTTNFPRRLKQHNGELKGGAKASRAGRPWICACLICGFTDRSEACVFESKWKAFSRRVPRKNQNDNLSKQSEDPSRPLLQHRQAALNKVKSSLDCSHLEINWHLDPL* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00149 166 Gene3D - 35 136 IPR035901 -
Rops3g00149 166 CDD GIY-YIG_SLX1 42 114 - -
Rops3g00149 166 SUPERFAMILY GIY-YIG endonuclease 41 117 IPR035901 -
Rops3g00149 166 ProSiteProfiles GIY-YIG domain profile. 40 122 IPR000305 -
Rops3g00149 166 PANTHER STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1 28 158 - -
Rops3g00149 166 Pfam GIY-YIG catalytic domain 42 116 IPR000305 -
Rops3g00149 166 MobiDBLite consensus disorder prediction 10 30 - -
Rops3g00149 166 MobiDBLite consensus disorder prediction 1 30 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00149 K15078 - gmx:100805152 273.092