Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00131 ATGTATAGTTCGTTTCCCCTGTGTTGGGTTCTCAGTCACCCCTTCTTTCGATATCTTAGCACGTTCCTTGAGGTGTCGGAAGCTGCCACAATGAATTTGGCATCGGGTGTTGGTGGAAAGATTGAAAAATCCGAAGTTCTGTCCGCTGTTGACAAGTACGAGAAGTATCATGTTTATTATGGAGGTGAAGAGGAAGAGAGGAAAGCCAATTACTCTGATATGGTTAATAAGTACTATGATCTTTCTACCAGCTTTTATGAGTTTGGCTGGGGGGAATCTTTCCATTTTGCAACCAGATGGAAAGGGGAATCTCTTCGAGAGAGCATCAAAAGACATGAGCACTTCCTTGCTTTACAACTTGGCCTGAAGCCTGGACAAAAGGTTTTGGATGTTGGATGTGGAATTGGGGGGCCACTGAGAGAAATTTCTCGATTCAGCTCAACATCAGTCACAGGGTTGAACAACAATGAGTACCAGATAACAAGAGGAAAGGAACTCAATCGCATTACTGGAGTGGACAAGACTTGCCACTTTGTCAAGGCTGACTTCATGAACATGCCATTCCCAGACAATAGTTTTGATGCAGTGTATGCAATTGAAGCCACCTGTCATGCACCAGATGCTTATGGATGCTACAAAGAGATTTTTAGAGTGTTGAAGCCTGGCCAACTTTTTGGTGCATATGAATGGTGCGTGACTGATGCTTTCGATCCCAATAACAAAGAACACCAAAGGATAAAGGCAGAAATTGAGATTGGTGATGGACTTCCAGACATTAGATTGACTTCAAAGTGTCTCGAAGCTCTGAAGCAAGCAGGATTTGAGATAATCTGGGAGAAAGATCTTGCAGCTGACTCTCCTCTTCCTTGGTACATGCCTCTGGATACAAGTCACTTCTCACTTAGTAGCTTCCGTTTGACAGCTGTTGGGAGACTTTTCACAAGAAACCTGGTCAAGGCTCTGGAATTTATTGGACTGGCTCCAGAAGGAAGTCTAAGGGTTCAACTTTTCCTAGAGAAGGCTGCAGAGGGACTCCTTGAAGGTGGAAAGAAAGAGATTTTCACACCAATGTACTTCTTTTTGGCACGGAAGCCTGATTCAGCCAATAACTAA 1113 0.4376 MYSSFPLCWVLSHPFFRYLSTFLEVSEAATMNLASGVGGKIEKSEVLSAVDKYEKYHVYYGGEEEERKANYSDMVNKYYDLSTSFYEFGWGESFHFATRWKGESLRESIKRHEHFLALQLGLKPGQKVLDVGCGIGGPLREISRFSSTSVTGLNNNEYQITRGKELNRITGVDKTCHFVKADFMNMPFPDNSFDAVYAIEATCHAPDAYGCYKEIFRVLKPGQLFGAYEWCVTDAFDPNNKEHQRIKAEIEIGDGLPDIRLTSKCLEALKQAGFEIIWEKDLAADSPLPWYMPLDTSHFSLSSFRLTAVGRLFTRNLVKALEFIGLAPEGSLRVQLFLEKAAEGLLEGGKKEIFTPMYFFLARKPDSANN* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00131 370 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 78 365 IPR030384 GO:0008168
Rops3g00131 370 Pfam Sterol methyltransferase C-terminal 302 365 IPR013705 GO:0006694|GO:0008168
Rops3g00131 370 CDD AdoMet_MTases 127 222 - -
Rops3g00131 370 Pfam Methyltransferase domain 129 224 IPR013216 GO:0008168
Rops3g00131 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 69 365 IPR029063 -
Rops3g00131 370 Gene3D Vaccinia Virus protein VP39 49 300 IPR029063 -
Rops3g00131 370 PANTHER ZGC:194242 29 365 - -
Rops3g00131 370 FunFam Methyltransferase 49 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00131 Rops-Chr3 1786116 1791775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00131 113 281 Acyl Lipid Metabolism Gene Families AT1G48600 32.544 1.39e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00131 K00559 - zju:107425735 634.409