Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00118 ATGGCATTTCACGTAGCTTGTCCAATTACATGTCGTCGAATCTGTTTTTGTGAGCTAGGGTTTCCGCGTTCTCTTCTAGGTACCGATTCTACCAATGGCTTCATCGACGATGTTGATGTGCTTAGTGAATTCCTTGCTGACACTCGCAAAGACGACGCCACCATTCAGGTTGCTGTCCCCAAGGTTTTGCCGCCGCCGCCAGAAGCTGTTCCCGTTGCCGGTGATGTGATTGATGAGTCAGCCTCCATGAAGGCCAAGCGTGTTGCCTTGCAGCGCAAGGGCGCCGCCGCCATGATCGCCGCTGAGGAGTATGCTCGCCGGTTTGAGTCCGGTGATGTGGCGGATACATTGGGAAACATTACTGGAGAAGAACAGGGTCAATCCAATGTCAAAGTCTTTTGTCGAATGTGCAATCGTGTCGAAAATGAAGGAAGTGAGAGAGCTAGAAAGATGCTGTCATGTAAAAGTTGTGGTAAGAAATACCATAGGAACTGCTTGAGGAGTTGGGCTCAACATAGAGATTTATTTCATTGGAGTTCATGGACCTGTCGTGCTTGCCGAATGTGTGAGGCTTGCAGAAGGACTGGTGATCCAAGTAAGTTCATGTTTTGCAAAAGGTGTGATGGTGCTTACCATTGTTATTGTCTGCAACCTCCTCATAAGAATGTTAGCACTGGGCCCTATTTGTGCCCAAAACACACAAGGTGTCACAGTTGCGGATCCAATGTCCCTGGAAATGGACTCAGTGTGAGGTGGTTTCTGGGATACACTTGCTGTGATGCATGTGGAAGATTGTTTGTGAAAGGGAACTACTGTCCTGTTTGTTTGAAGGTTTACAGAGATTCAGAATCAACGCCAATGGTTTGCTGTGATATTTGCCAGCGCTGGGTACATTGCCACTGTGATAATATTAGTGATGAAAAATATCTCCATTTTCAAGTGGATGGGAATCTGCAGTATACATGTCCCACTTGTCGTGGGGAATGTTATAAGGTCAAGAATCTTGATGATGCTGTACAAGAGCTTTGGAGGAGAAGGAATGATGCTGATAAAGATTTAATTGCCAGCTTGAGGGCTGCAGCCGGTTTACCAACACAAGATGAAATATTTTCTATTTCACCATATTCAGACGATGAGGATAGTGGGCCTTTGAAATTAAAGAGTGAATCTGCTCGTTCCTTTAAGTTTTCTATAAAGAATGTGTCTAATAACTCTCCAAAGAAGATGAAAGATTATGGAAAGAAATCTTCAAGCAAAAAGACTGCAAAGAAAAAGGACTCTCAGTCATTCTTGACTGGGAAAATGGATACACACCATAGTTTTGAAGGACATAGTGATATTAAGTCTTTACATAGCTTGGATGATGATAAGAATGATGATATACAATCCCAGAGAAATGAAGGTCCTGATGTTTATTCATCACCTGCTACTGGAAGTCTGAGTCAAACTGAAGTATCTTGCCCTATCAATCAGCCAGGGATTTTGAAACACAAGTTTGTTGATGAGGTGATGGTCAGTGATGAAGAGAGGAAATCCAGAGTTGTTCGAATTAAAAGCAATAAGGCACATGTTCTGGATAGTGAAGAGGAGATTGGAAAACATGGTGACAAGACTCAGAATGTGAAAGGGAAAAAATTGGTTATAAATTTGGGAGCACGGAAAATTAATGTAGCTAGTTCTCCGCGGTCTGATAATTCAAGCTGCCAAAGAGATCAGGATCTGGTTACTGTTAATGGAAATGAAGATATAAGCCATTTGAGGAAGGGAGACAAGTTTTCATTAGATAGACATGATGGGACAGCTAGACATATTGATGGTAAAGGAAACAGAGTTGATTCTGGCCAATCAAAATTTTTAAAGGTTTCGGGGAGAGAAGGAAATTTGATTAAGCTGGGAAAAGTTAAGCCAGATGTTTCTGAATTTAACTTGACCCCTGGTAGAGGCAATATGTCTGATGGGTGTGAAGTTGCTCCTTTAGAGCGAACACGCATCTTGCGTGGAAAACGTAGTACTGATGGAATGATTGATCAAGTTGGAACAGAAGCTACATCAAGAGGTGAAAGGACCTATTTTGGGAAGCAGTCTGAAGGCAGCTCCGATGCATATGATGAGACAGATGACAATAATAATCAGACACCTTCGCATTCTTTGCCAAAAGATTCTAAACGTTTACTGAGATTTAAATTAAAAAAACCCAGCATTGAAAGTCAAAATTCTCCTCATCAGGAGGAGGAGAAGAGCACAATAAAGGGCCAGAGGTCAAAACGGAAGAGACCTTCACCTTTTAAGGAGAAAACATCATTTAATGGGTCTGAAGATGTAAGTCTATCGCATCAAGACAGTGTAATGGATGAGATCTTGGATGCAAACTGGATATTGATGAAATTGGGCAATGATGCTATTGGAAAGAGAGTTGAAGTTCATCAGGCATCTGACAATTCTTGGCACAAGGGAGAAGTTACTGATACAGTTGAAGGCACTTCGAAGTTGTATGTTACCTTAGATGATGGGAATGTGAATATCTTGGAACTCAGGAAGCAAGGGGTCCGTTTTGTTCCTCAGAAGCAAAAGAGATCAAAGACATGA 2586 0.4211 MAFHVACPITCRRICFCELGFPRSLLGTDSTNGFIDDVDVLSEFLADTRKDDATIQVAVPKVLPPPPEAVPVAGDVIDESASMKAKRVALQRKGAAAMIAAEEYARRFESGDVADTLGNITGEEQGQSNVKVFCRMCNRVENEGSERARKMLSCKSCGKKYHRNCLRSWAQHRDLFHWSSWTCRACRMCEACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKNVSTGPYLCPKHTRCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDICQRWVHCHCDNISDEKYLHFQVDGNLQYTCPTCRGECYKVKNLDDAVQELWRRRNDADKDLIASLRAAAGLPTQDEIFSISPYSDDEDSGPLKLKSESARSFKFSIKNVSNNSPKKMKDYGKKSSSKKTAKKKDSQSFLTGKMDTHHSFEGHSDIKSLHSLDDDKNDDIQSQRNEGPDVYSSPATGSLSQTEVSCPINQPGILKHKFVDEVMVSDEERKSRVVRIKSNKAHVLDSEEEIGKHGDKTQNVKGKKLVINLGARKINVASSPRSDNSSCQRDQDLVTVNGNEDISHLRKGDKFSLDRHDGTARHIDGKGNRVDSGQSKFLKVSGREGNLIKLGKVKPDVSEFNLTPGRGNMSDGCEVAPLERTRILRGKRSTDGMIDQVGTEATSRGERTYFGKQSEGSSDAYDETDDNNNQTPSHSLPKDSKRLLRFKLKKPSIESQNSPHQEEEKSTIKGQRSKRKRPSPFKEKTSFNGSEDVSLSHQDSVMDEILDANWILMKLGNDAIGKRVEVHQASDNSWHKGEVTDTVEGTSKLYVTLDDGNVNILELRKQGVRFVPQKQKRSKT* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00118 861 MobiDBLite consensus disorder prediction 665 775 - -
Rops3g00118 861 SUPERFAMILY FYVE/PHD zinc finger 178 239 IPR011011 -
Rops3g00118 861 MobiDBLite consensus disorder prediction 737 751 - -
Rops3g00118 861 MobiDBLite consensus disorder prediction 408 464 - -
Rops3g00118 861 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 266 328 IPR013083 -
Rops3g00118 861 MobiDBLite consensus disorder prediction 397 486 - -
Rops3g00118 861 SUPERFAMILY FYVE/PHD zinc finger 125 189 IPR011011 -
Rops3g00118 861 CDD PHD_SF 133 186 - -
Rops3g00118 861 FunFam PHD finger family protein 128 243 - -
Rops3g00118 861 FunFam PHD finger family protein 266 328 - -
Rops3g00118 861 MobiDBLite consensus disorder prediction 676 718 - -
Rops3g00118 861 ProSiteProfiles Zinc finger PHD-type profile. 131 189 IPR019787 -
Rops3g00118 861 MobiDBLite consensus disorder prediction 465 486 - -
Rops3g00118 861 SUPERFAMILY FYVE/PHD zinc finger 269 328 IPR011011 -
Rops3g00118 861 ProSitePatterns Zinc finger PHD-type signature. 134 186 IPR019786 -
Rops3g00118 861 ProSiteProfiles Zinc finger PHD-type profile. 269 328 IPR019787 -
Rops3g00118 861 PANTHER HL01030P-RELATED 92 483 - -
Rops3g00118 861 SMART PHD_3 271 326 IPR001965 -
Rops3g00118 861 SMART PHD_3 188 234 IPR001965 -
Rops3g00118 861 SMART PHD_3 133 187 IPR001965 -
Rops3g00118 861 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 243 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00118 Rops-Chr3 1663736 1672262 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00118 - - gmx:100815407 1403.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00118 3 1663736 1672262 Rops3g00118 3 1663736 1672262 ECH