Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00117 ATGGGATTTGATAACGAGTGCATTCTGAACATTCAATCCCTTGCCGGAGAGTACTTCTGTCCTGTTTGTCGCATGCTTGTCTTTCCAAATGAAGCTTTGCAGTCGCAATGTACTCATTTATACTGCAAGCCGTGCTTGACCTACGTAGTGAGCACTACGAGGGCTTGTCCATATGATGGTTATTTGGTCACAGAGGCTGATTCCAAGCCTCTGATTGAGTCAAATAAGGCACTTGCGGAAACTATTGGAAAAATACCAGTTCATTGCCTATATCATAGGAGTGGATGCACATGGCAAGGAACTCTGTCCGAGTGTATATCTCATTGTCCTGGATGTGTTTTTGGTAATTCTCCAGTTGTTTGCAACAGGTGTGGGATCCAAATAGTGCATCGCCAAGTACAAGAACATGCACAAAATTGTCCTGGCGTGCAAGTTCAGGTGCAACAGGTGGCAACTGCCCAGGATCCTTCAGCCACTAGTGCTATTGCTTCTACTGATCAGAACCAGGCTGCTGCTCCAGTTGGAGCAACGGCTTCTCAAGCTCTGACTTCTCAACCTGTTGTTACAGCAGCTACCACAACTGTGCAGGTTTCAAATCAGCTACCCAACCCAGCTTCTCAAACTCAAGCTTTAGCTCAAACTGTTGTGCAGCCAACGGCAGAGCAATGGTATCAGCAGCAACAATATCAACAATACTACCAGCAATACCCTGGACAAGATCCATACCAACAGCAGTACCAACAATACTACCCCTATCAACAGTCTGTAGTTCCACAATACCAGCAGGCTTATGGACAGCCCCAACCTCAGTCTCATTCACAGCCTCAACCTCAACCTCAGCCACAACCCCAACCTCAGCCCCAGCCCCAGCCACAGACCCAATCCCAATCACAACCTAATCAACCACAGCCTCAGGCACAAGGACTGTCTCAACCGCTTTCACATGTTCAGGCTCCTGTGGCCCTACAATCTCAGAATCAGATGCAAGTTCACCAACAACCTCAGCAGCTTCAACCTGCTGCGCAGCCACATGGTCAGATGAGTCACCCACCTGGCCACGGTCAAGCCCTCCCTCAGCCACAGTCTTATCCTTACCCTCAAGTTCAGCCTCATTCTGTCCAACCTCAACCACAACAACATATGCAAATGCCTCCTTATCAGCAGTCTCATCCTCAAATGCAGCATTCACAGCCTCAAATTCAACAACCAGTTCAGAAGTATCCTGTTCCTCAACCTCAAGTTCATCCACAACCGCAACCTAATACTCCAGTTCAACATCCTTCTCAGTCCCAGATGCATCCTCACCAGCCCACGACTCCTAATGTCCAGCCTCAAGTGCAAAGTGCATCGTCGCATGCAGTGACAGGTCATCACTCTTATCCCCAACCTCTGCCTCACCAGAATATGCAACCGGGAGCCCCTCAACACACTATGCACATGCATCCTCAAAGTGGGCCTCAACTCCAGGCCCCACATTCTGTCCAGATGCAGAATCAATTTCCTCAGCAAATTCCAATGATGCGCCCAAATCAATCTCACACTATGTTTCCTAACCAGCAACATCAACCTGTTCAGGGTCAAAGCACCCCTCCTTTGCAACAGCAGCCAGTATATACTCATAATCAACAACCTGGACAGATCAACCAACGTCCTATTTTGCCGCAGCAACCATTTGCACAACACCAGATGCCTCTGCCATCTCATTTACGACCCCAAGGTCCAGCACATCCATTTCCCAAGCATGCTTATCCACCATCACAGGGTAATACTGCACTATCAAATAGCACTCAGCACAATCAATCTCAAAATGCTGTAGGAAGGCCTTTGATTCCAAATCATGCAGGACATGTACAACCATTTGCACAATCTGCCAACACCATTCCAGTTAGACCAGGGAAAAATGGTGCTGGTTACCTGCCTGAAAATCAGAATATGTTGGTTGGGACCAATAATCAAACACAGTTGTCTTCTGAATCACATTCCAGGGCACCGGAACCAATTGAAAGACAAGGTAATGTCATGGAGCAACAAACTGACTCTGCCTCTGGGAAACTTGGTAAAATTTTTAAGGATTTGGACAGAGTGTCTGGATCAGCAAATGAGTTGAAATCTGAAAAAGAAACTGATTCAAAACCAACTGAGGCTGGGAGTAAGCAAAATAATGAAGATCCACACTCTGTGAAGACTTTAGGCCCAAATGCAACTGCATTAGAAAATGGTGATTCAGTGACTAAGAATATTGGTGCAATGCCTGGGGTTCAAAATGATAGTAATGAGCATTCTGTTGTCCAAGGTAATGAGATTCAAGATGGACCTCCACTGAAGAAGATAGAGACAAAATTCCCCGAGTCAGAATCTGGTAAACTGCATGGTGATGACACAGGTCCTCCAAGACCTCCTTCTGGTACTGACAACCCAGCAGCAGCTGTCTCCCAAATAGATGGTGGTCAAGGGCCTGGTGTTGATGAATACAGAGGGATGCAATCTGGGGCTTTTGCTCAGCTGTCTCATCCAGATCCTTTTACTGATCAGGCTAAACATCAGCAACCGATGATTAATTATAGGCCGCATGCTGTCCAGCAGAGGTCTTCTGCAATGTTGGCATCACAAATGCCACATCCAGCAGTTGCAAATCAGCCACTCTCTGCAGGGAACTCTTCAACTCTTCTCAGGAATCAGGGACCTGCCCCTGCTCTTCATTCAGGACAGCCCTTAAACACTCCAGGGCGAAGCTTTCAACCTCAGTCTCTTGGATCCCTGGGACCATATAACCATGTCCATGAGCCTCCTTTCCATGCTGGAGCATCCAATTTGTCTCATATTGGAGGGCCACAATTTGGTGCACCACCTCCTGGAGATATGCATGGTGGAATGACAGCCAACTTACCACCACATGCTCCGGAAGGGTATGGTTTGCAGGATGGAAGGTTCAAATCTTTCCCGGTTCCAAGTCAACAAAATATTGATCGAAGAGATATCAAAGATGATCTCAAGAAATTCCCCAGGCCACCTTTGGATGCTGAGCCAGCTTCTAAATTTGGAAATTATTCATTGGGTCCACATGAAGCAGGAAAGAGACCACTTGGTTTTCATGATGATGCCATCAAGAAATCAGGTTCTACTCTACATCCTGGTTATCTTGGACAAGGTCCTGGATATGGGAGACATGGTATGGATGGTATGGCTCCGAGAAGTCCTGTTAGTGAATATACTGAGATGTCTTCCCGAAGATTGGGACCCCTTTCTGGTGGTCTTGCTAGTAAGTCAGGTATAGATGATTTTGGTGGCAGAGCTGCTAGTCGTTTTGGTGAGTCAGTTGGCATTGCATTCCGTGACAGCCGATTTCCTCATCTGCCTAGCCATTTGCATAGAGACGAGTTTGATGATTTTGGTAATTTTCGAATGGGTGAACATCCAAGGGGTGGTGATTTCATTGGTCCAGATGAATTTGCTGGCCATTTTCGGAGGGGTGAACACTTTGGTCCGCATAATTTTCCTAGACATTTGCAGCTTGGGGATCCTATTGGTTTTGGTGCCCATCCTAGTCATATGCGAGCAGTTGAACTTAGTGGTTCTCGGAGTTTTGAATCTTTCGGCAAAAGCAACAGGTCAGGTCATCCGCAGCTTGGTGAGCCTGGGTTCAGGAGCAGCTTTTCCCTTCCAGGATTTCCTAATGATGCTGGATTCTTAACAGGAGATATCAGGTCGTTTGATAATTTGAGGAGAAGGAAGGCTGCTAGCATGGGGTGGTGCCGGATATGTAAAGTTGACTGTGAAACAGTTGAAGGTTTGGACTTGCATTCTCAAACAAGGGAACACCAGAGGATGGCCATGGATATGGTTAAAACAATCAAACAGAATGTAAAGAAACAGAAATTAATACCCAGTGAACAATCGTCAGTTGAAGATGGAAACAAGATGCGGAATACTGGTTTTGAGGGTCGTGGAAATAAGCATTGA 3960 0.4654 MGFDNECILNIQSLAGEYFCPVCRMLVFPNEALQSQCTHLYCKPCLTYVVSTTRACPYDGYLVTEADSKPLIESNKALAETIGKIPVHCLYHRSGCTWQGTLSECISHCPGCVFGNSPVVCNRCGIQIVHRQVQEHAQNCPGVQVQVQQVATAQDPSATSAIASTDQNQAAAPVGATASQALTSQPVVTAATTTVQVSNQLPNPASQTQALAQTVVQPTAEQWYQQQQYQQYYQQYPGQDPYQQQYQQYYPYQQSVVPQYQQAYGQPQPQSHSQPQPQPQPQPQPQPQPQPQTQSQSQPNQPQPQAQGLSQPLSHVQAPVALQSQNQMQVHQQPQQLQPAAQPHGQMSHPPGHGQALPQPQSYPYPQVQPHSVQPQPQQHMQMPPYQQSHPQMQHSQPQIQQPVQKYPVPQPQVHPQPQPNTPVQHPSQSQMHPHQPTTPNVQPQVQSASSHAVTGHHSYPQPLPHQNMQPGAPQHTMHMHPQSGPQLQAPHSVQMQNQFPQQIPMMRPNQSHTMFPNQQHQPVQGQSTPPLQQQPVYTHNQQPGQINQRPILPQQPFAQHQMPLPSHLRPQGPAHPFPKHAYPPSQGNTALSNSTQHNQSQNAVGRPLIPNHAGHVQPFAQSANTIPVRPGKNGAGYLPENQNMLVGTNNQTQLSSESHSRAPEPIERQGNVMEQQTDSASGKLGKIFKDLDRVSGSANELKSEKETDSKPTEAGSKQNNEDPHSVKTLGPNATALENGDSVTKNIGAMPGVQNDSNEHSVVQGNEIQDGPPLKKIETKFPESESGKLHGDDTGPPRPPSGTDNPAAAVSQIDGGQGPGVDEYRGMQSGAFAQLSHPDPFTDQAKHQQPMINYRPHAVQQRSSAMLASQMPHPAVANQPLSAGNSSTLLRNQGPAPALHSGQPLNTPGRSFQPQSLGSLGPYNHVHEPPFHAGASNLSHIGGPQFGAPPPGDMHGGMTANLPPHAPEGYGLQDGRFKSFPVPSQQNIDRRDIKDDLKKFPRPPLDAEPASKFGNYSLGPHEAGKRPLGFHDDAIKKSGSTLHPGYLGQGPGYGRHGMDGMAPRSPVSEYTEMSSRRLGPLSGGLASKSGIDDFGGRAASRFGESVGIAFRDSRFPHLPSHLHRDEFDDFGNFRMGEHPRGGDFIGPDEFAGHFRRGEHFGPHNFPRHLQLGDPIGFGAHPSHMRAVELSGSRSFESFGKSNRSGHPQLGEPGFRSSFSLPGFPNDAGFLTGDIRSFDNLRRRKAASMGWCRICKVDCETVEGLDLHSQTREHQRMAMDMVKTIKQNVKKQKLIPSEQSSVEDGNKMRNTGFEGRGNKH* 1320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00117 1319 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 118 IPR013083 -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 1292 1306 - -
Rops3g00117 1319 SUPERFAMILY RING/U-box 13 73 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 773 792 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 272 292 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 360 408 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 424 474 - -
Rops3g00117 1319 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1A-LIKE 1022 1318 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 586 607 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 480 495 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 409 423 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 904 920 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 858 1078 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 625 644 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 325 495 - -
Rops3g00117 1319 ProSiteProfiles Zinc finger RING-type profile. 20 59 IPR001841 -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 1292 1319 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 651 825 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 293 312 - -
Rops3g00117 1319 ProSitePatterns Zinc finger RING-type signature. 37 46 IPR017907 -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 719 765 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 562 615 - -
Rops3g00117 1319 SUPERFAMILY TRAF domain-like 84 141 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 875 894 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 262 312 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 988 1005 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 325 343 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 507 549 - -
Rops3g00117 1319 MobiDBLite consensus disorder prediction 686 718 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00117 - - gsj:114380210 1306.97