Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00112 ATGAAGAAGAGGGTGTTGGAGTTTGAGAAAATGGGTTTTTGGGTAGCATTAGGTTTGGTTCTGAATGTTATTGTGGTGTGTAATGGAGGTAACACAAGCATCTTCGTTAGGAAAGTCGAGAAAACTGTGGATATGCCACTTGATAGCGATGTTTTTGCCGTCCCTTCTGGTTATAATGCTCCCCAGCAGGTTCATATAACACAAGGTGATCTTGTGGGGAAAGCAGTGATTGTGTCATGGGTGACTCAAGATGAACCAGGGTCAAGCAAAGTGCGTTACTGGAGTGAGAACAGCAAGGAAAAGAAGCTAGCTGAAGGAAAAGTTGTTACTTATAGGTTCTTCAATTACACATCTGGTTTTATTCATCACGCTACTATCAGAAATTTGGAGTACAACACCAAATATTACTATGAGGTTGGAATTGGGAACACAACACGGCAGTTTTGGTTTTTAACTCCTCCTGAAGTAGGTCCTGATGTGCCATACACATTTGGTCTCATAGGGGATCTTGGTCAGAGTTTTGATTCAAATAAGACGCTTTCTCACTATGAAAATAACCCAAGAAAAGGACAAGCTGTGCTGTTTGTTGGAGACCTCTCTTATGCGGATAACTACCCAAATCATGATAATGTTAGATGGGATACTTGGGGAAGGTTTACAGAAAGGAGTACTGCTTATCAACCATGGATATGGACTGCAGGGAACCATGAAATTGATTTTGTTCCAGAAATTGGTGAAACCCAACCTTTCAAGCCTTATACCCACCGTTACCATACTCCTTATAGAGCATCACAGAGTACTGCACCCTTCTGGTATTCTATCAAGAGAGCTTCAGCACACATCATTGTCTTGGCCTCATATTCAGCATATGGAAAATATACACCCCAATACAAATGGCTTGAAGAGGAGCTGCCGAAAGTTAACAGGACAGAGACTCCTTGGTTGATTGTTCTCATGCATTCACCTTGGTATAATAGCTACAATTATCATTATATGGAAGGGGAAACAATGAGAGTAATGTATGAGCCCTGGTTTGTGAAGTACAAGGTTGATGTTGTGTTTGCTGGTCATGTTCATGCCTATGAACGATCTGAGCGTATCTCCAATGTTGCATACAATGTTGTAAATGGTCTTTGCACTCCTATAAAAGATCAATCAGCTCCTGTATATATAACCATTGGGGATGGAGGAAACCTTGAAGGCTTAGCAACCAACATGACAGAACCACAGCCAGAGTACTCTGCATACCGAGAAGCCAGCTTTGGACATGCCATTTTTGACATAAAGAACCGAACACATGCTCACTATAGCTGGCATCGAAATCAAGATGGATATGCTGTGGAAGCTGATTCTATCTGGTTTTTCAACAGATATTGGCACCCAGTTGATGATTCCACAACTCATGTTTCACATTAG 1416 0.4145 MKKRVLEFEKMGFWVALGLVLNVIVVCNGGNTSIFVRKVEKTVDMPLDSDVFAVPSGYNAPQQVHITQGDLVGKAVIVSWVTQDEPGSSKVRYWSENSKEKKLAEGKVVTYRFFNYTSGFIHHATIRNLEYNTKYYYEVGIGNTTRQFWFLTPPEVGPDVPYTFGLIGDLGQSFDSNKTLSHYENNPRKGQAVLFVGDLSYADNYPNHDNVRWDTWGRFTERSTAYQPWIWTAGNHEIDFVPEIGETQPFKPYTHRYHTPYRASQSTAPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEEELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVKYKVDVVFAGHVHAYERSERISNVAYNVVNGLCTPIKDQSAPVYITIGDGGNLEGLATNMTEPQPEYSAYREASFGHAIFDIKNRTHAHYSWHRNQDGYAVEADSIWFFNRYWHPVDDSTTHVSH* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00112 471 PANTHER ACID PHOSPHATASE RELATED 17 455 IPR039331 GO:0003993
Rops3g00112 471 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 157 465 - -
Rops3g00112 471 CDD MPP_PAPs 158 456 IPR041792 -
Rops3g00112 471 Pfam Purple acid Phosphatase, N-terminal domain 61 150 IPR015914 GO:0003993|GO:0046872
Rops3g00112 471 SUPERFAMILY Metallo-dependent phosphatases 158 465 IPR029052 -
Rops3g00112 471 Gene3D - 60 156 - -
Rops3g00112 471 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 60 156 - -
Rops3g00112 471 SUPERFAMILY Purple acid phosphatase, N-terminal domain 43 154 IPR008963 GO:0003993|GO:0046872
Rops3g00112 471 Gene3D - 157 466 IPR029052 -
Rops3g00112 471 Pfam Iron/zinc purple acid phosphatase-like protein C 387 446 IPR025733 -
Rops3g00112 471 Pfam Calcineurin-like phosphoesterase 163 361 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00112 Rops-Chr3 1578039 1582174 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00112 48 444 Miscellaneous Gene Families AT1G13900 26.350 3.24e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00112 K22390 - gmx:100807555 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00112 3 1578039 1582174 Rops3g00112 3 1578039 1582174 ECH