Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00096 ATGTCGAAGGATAAAGACCCTACCAATTTGTCACGCACCTTCAAATACCTTTTAGCTACTCAGTTCTTGTCTAGAGGAATTCCATTTATATTCAATACATGGATTGTAAGGCATCTTACTGAGGAGGACTATGCGCTGTATGCAGTACAGTTTCAACTGTTTGTCACATGTGTTTTATTTCTTAGCCGGGAAGGCATCCGACGAGCATGTATGCGGATGGACATGAAATGTGATGGCACTTCAATGGAAGAGGATGTTGCGAAGCTAATGAAAGTAGTCTGGATGAGTGTCCCACTTGGAATATTTATTACAATTGTTGCATGCCTTTTTGTCTTCTGGTGGCAAGAAATAAGTTATTTTAGTCCACATGGGCAAGCTATCTTGATCAATGGTGGTGCGTGCATTTTGGAGCTTTTGGCTGAGCCTTTGTATGTTCTTTCACAAAACTTGGTCTTGCTTGAATTACGGTTGATGGTTGAGACACTAGCTACTCTCTCACGGTGCTTGACATTGTACTTCCTAATTGTCAAGCAAACTGGATTGAGTCTAGACAGTAGTCTGATGGACTATAGTAATCTCCATGTAAATGCAACTGATTCAGAGTTGAATGGCCATTTCCAGGAAAAATCAATCATATTTGCATTGTCACAGTCTGCATATGGAGCCTGCTTATTTCTTGGTTATTGGGGCTATATGGTTCTTTTGCGCAAATTTAGATGCTCTTCCCTTTTCCCATTCAGAGAAGGAAAAGTGATTGATTTTGACCAGCAGCTGTCCAAGATGTGTATGCTGTTTACCTTTCAATCCTTTCGAAAATTGATCCTTCAGGAAGGAGAAAAGATAGTGCTTGTGTGGTTGGATACACCATATAATCAAGCTGTATATGGCCTTGTGGACAAATTAGGTAGCTTAGTGGTGAGGCTTGTCTTTTTACCTTTTGAAGAAAGTTCATATGTAACATTTGCAAGGTCCGCTTCAGGACAATACCCAGGAAAAAGCAAGAAATTAGGAAACGGCTTGACAGAATCCCTTAAATTAGTTTTATTGATCGGCCTTGTTTTTATGGCATTCGGTCCAAGTTATTCTTATTCACTCATTAGATTGCTGTATGGCAAAAAATGGAGTGATGGAGAAGCATCAACTGCCCTCCGCTATTATTGCCTTTATGTCATTGTTTTGGCTATGAATGGAACCTCTGAAGCCTTTATGCATGCAGTTGCATCAGAGAGTCAACTCAAGCATTCAAATGATTCACTGCTTGTATTCTCTTTGATCTATATAGTTTTGAATGTCCTACTAATAAGATTAGCAGGGGCAGTTGGCTTGATTATGGCAAATTCTCTTAATATGACTTTGAGGATTTTATACTCTTCAATATTCATAAAGAATTACTTCCAGGGATCTTCCTCGTTTTCTTTCTATGGCTGCTTGCCTTCAGGATGGATTATTCTGTTACTTTCAGGTGTAATCACTCTCATTTCTGAGAATGTATTTTTGGACCAAGATAATTTCTGGCCAACATTTATGATCCATTTCTCTGTTGGGCTGGCTTGCTTCTGTGTGTCATCATATGTGATCTATTGTCGGGAAAAACCTTTCATCAAAAGAATTATTCGCTTTCGAGATCACTCGGACTGA 1638 0.3926 MSKDKDPTNLSRTFKYLLATQFLSRGIPFIFNTWIVRHLTEEDYALYAVQFQLFVTCVLFLSREGIRRACMRMDMKCDGTSMEEDVAKLMKVVWMSVPLGIFITIVACLFVFWWQEISYFSPHGQAILINGGACILELLAEPLYVLSQNLVLLELRLMVETLATLSRCLTLYFLIVKQTGLSLDSSLMDYSNLHVNATDSELNGHFQEKSIIFALSQSAYGACLFLGYWGYMVLLRKFRCSSLFPFREGKVIDFDQQLSKMCMLFTFQSFRKLILQEGEKIVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYVTFARSASGQYPGKSKKLGNGLTESLKLVLLIGLVFMAFGPSYSYSLIRLLYGKKWSDGEASTALRYYCLYVIVLAMNGTSEAFMHAVASESQLKHSNDSLLVFSLIYIVLNVLLIRLAGAVGLIMANSLNMTLRILYSSIFIKNYFQGSSSFSFYGCLPSGWIILLLSGVITLISENVFLDQDNFWPTFMIHFSVGLACFCVSSYVIYCREKPFIKRIIRFRDHSD* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00096 545 Pfam Rft protein 13 538 IPR007594 GO:0006488|GO:0016020
Rops3g00096 545 CDD MATE_rft1 9 467 - -
Rops3g00096 545 PANTHER ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED 1 542 IPR007594 GO:0006488|GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00096 K06316 - gmx:100817452 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00096 3 1139600 1152223 Rops3g00096 3 1139600 1152223 ECH