Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00095 ATGGCCCTCCTCACTTTCCCACACTTTCCCTCACTTTCCTTCTTCCCAAACACTCGCTTCTCTTCAACTCGGCGATGTTGCTCAATCACGGCAACTGGTACCGCCATTCTGTGGTTCAAGCACGATCTCCGAACGGATGATCATCCAGGACTCCTTGCTGCCTCTAAATTTCAATCACTGGTTCCTATTTACGTCTTCGATCACCGTATTCTTTCACGTTTTTCCGATGAAATGCTGGAACTGGTTCTGTTTGCTTTGCAAGATTTGAGGAAGTCATTGCAAAATCGTGGTTCTGATCTAATGATTAGGTTCGGAAATGCTGAGAATGTGATACAGCAACTTGCAACTGAGGTGAAAGCCACTTGTATATTCGCGGAACAAGAGGTGGAGTATGAACTACGCTTCATCATGGATGTTGTCAACAAGAGTTTGAAATCTGTCATGGTTCCACAAGGCACACCAAAGATTGAATTATGGAACGCTCCCTTTTATGATGTAAAGGATCTGCAAAATGTTCCTGCATCATATGATGACTTTAAGAAACTTCGACTCCCTGTAACTACACCACTTCAGCTGTCAACATTACCTGCTGCAGAAATGGAACTGGACTGGGGTGCTCTTCCTGTATATGATGATATAAAGGAATTCATGACTAGCAACCAACAGAAATCGGGAGATAATTGGAATTTAATCAAGGATACATCAGCTGAAACCTTATTACGCAGAGAAATGTTGAAGTCTAGAGAGGACAGTGAAAGAAGTAATAGCTTTAGACAGGTGCGGTCAAGGAAACCAAATGAATCTGTTTTTGTGACACGAAAAGGAAATGTTGTAGGAGGTGGAACAAATAATGTACTGAATGCATTGGCTGCATATTTGAGATATTTGGAGGGAACAGCTCGTGATGACTGGCAAGAGGTACATGAAAAGTTGCTTGCTTCTGAAAGTCGGAATGGAGCATCATTTATTGAACTCTTCGGTCCTGCCCTATCTCTTGGCATTATATCTAGAAGAAGAGTACATTATGAAGCTATCAAATATGAGAAAGAACGAAATGCAGGATTCTTACCTCCCTTTGGATATTCAGCAACCACAATTGCAGCAGCAGTTGACGCTGTGTGCTCAAAGGAGTGGTATTGGCTTATGGCTTTGAGAGATCAGATAAATAATGATGGAATACACTCAACACGGATATGGAGATGGAATGGTTTTCTTATTCAGTATACAGTTGCTGGTGAAGATGGACCTTCTGTTCTTCTTGTGCATGGTTTTGGTGCTTTCGGGGAACATTACCGTGACAATATACATGGTTTAGCTGGAGCTGGGAATCGAGTTTGGGCTATTACAATATTAGGATTCGGAAAATCAGAAAAGCCAAATATTGTATATACTGAGCTCTTGTGGGCTGAACTACTGAGAGATTTTATTGTTGATGTTGTGGGTGAACCGGTCCACCTTGTTGGCAACTCAATTGGTGGTTATTTTGTTGCTATTGTTGCTCGCATTTGGAGTGTTTTGATCAAATCCATTGTCTTGATCAACAGTGCTGGCAATGTCATCCCAAGATATACATCTATACCATTGTCTAGATTAAGTGATAGACAAACTTCAGGGGCTTCCTGGTTGGGTTCTCGCATTCTTCTATTCTACTTGAGGCTAAGACTTCAAGAAATAGTGAAGAAATGTTATCCAACTAGGGTTGAAAGAGCAGATGATTGGCTCATAAATGAATTGCTAAGAGCATCATATGATCCTGGTGTGGCTGTGGTCTTGGAAAGCATCTTTAGCTTTAATCTTTCCATACCTCTTAACTATCTTCTTGAAGATGTCAAGGAAAAGGCTCTAATCATACAGGGGATGAAAGATCCAATTGCTGACTCCAATGCCAAGGTGGCTATGCTTAAAGAACATTGTGATGGTGTGATAATTAAGGAATTAGATGCTGGCCATTGTCCGCACGATGAGGTGCCAGAACGAGTGAATACCATTATTTGTGACTGGATACTTAGGGTGGAAAGTAAAATTATGGCAGGGTGCCCTGTATAA 2046 0.414 MALLTFPHFPSLSFFPNTRFSSTRRCCSITATGTAILWFKHDLRTDDHPGLLAASKFQSLVPIYVFDHRILSRFSDEMLELVLFALQDLRKSLQNRGSDLMIRFGNAENVIQQLATEVKATCIFAEQEVEYELRFIMDVVNKSLKSVMVPQGTPKIELWNAPFYDVKDLQNVPASYDDFKKLRLPVTTPLQLSTLPAAEMELDWGALPVYDDIKEFMTSNQQKSGDNWNLIKDTSAETLLRREMLKSREDSERSNSFRQVRSRKPNESVFVTRKGNVVGGGTNNVLNALAAYLRYLEGTARDDWQEVHEKLLASESRNGASFIELFGPALSLGIISRRRVHYEAIKYEKERNAGFLPPFGYSATTIAAAVDAVCSKEWYWLMALRDQINNDGIHSTRIWRWNGFLIQYTVAGEDGPSVLLVHGFGAFGEHYRDNIHGLAGAGNRVWAITILGFGKSEKPNIVYTELLWAELLRDFIVDVVGEPVHLVGNSIGGYFVAIVARIWSVLIKSIVLINSAGNVIPRYTSIPLSRLSDRQTSGASWLGSRILLFYLRLRLQEIVKKCYPTRVERADDWLINELLRASYDPGVAVVLESIFSFNLSIPLNYLLEDVKEKALIIQGMKDPIADSNAKVAMLKEHCDGVIIKELDAGHCPHDEVPERVNTIICDWILRVESKIMAGCPV* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00095 681 Gene3D alpha/beta hydrolase 387 671 IPR029058 -
Rops3g00095 681 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 33 169 IPR006050 -
Rops3g00095 681 SUPERFAMILY alpha/beta-Hydrolases 395 668 IPR029058 -
Rops3g00095 681 Pfam Alpha/beta hydrolase family 418 661 IPR000073 -
Rops3g00095 681 Pfam DNA photolyase 36 169 IPR006050 -
Rops3g00095 681 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 34 210 IPR036155 -
Rops3g00095 681 Gene3D HUPs 20 177 IPR014729 -
Rops3g00095 681 PANTHER DNA PHOTOLYASE 30 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00095 Rops-Chr3 1117874 1122335 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00095 - - gmx:100813721 1124.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00095 3 1117874 1122335 Rops3g00095 3 1117874 1122335 ECH