Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00092 ATGGATCCAAATCCGAGCTCTCCAAGTCGCCGGAAGATGAAGTTCAAGCCGAGGAAGCTCACACCTAGATCCAAATCCCAATCCCAGGCAACCGAAACTGAAGAACAACGCGAAGATAGGGCAGTGGAACAAGCTCTCCTGCGTCATTTGAATGATCTTGGAAGACGCGAGCCTAAAGTTGAAAGCAAATCTATTGCCCAAGTTGCATTTGGTCCCGTAAATTCATCACCTCGCCTGAGAACATATGGCATTGGTAAGGGTGGTAAAAGCAGCAGCAGCTCAGCATCTGAATATTTTGCTAATGAACAAAATTCAACAGCTATCGAGGATCAAAGCGATTCTAGTATGATAGATGTTACTAATGATACATCTGATGCATCAGCCAGGAAAATCAAAAGAGAGTACAAGGAGCCATGGGATTATCACAACTCTTACTACCCTACTACTCTTCCTCTGAGGAAGCCCTATTCTGGAGATCCAGAAATTCTTGATGAGGAAGAATTTGGGGAGGCTGCTACTAATAAGGAGTATGATGAGAATGCTATTAATTCCGCTGCAGAACTCGGGCTCTTGGATAAAAGTGAGCAACAAAGGATGCTTCTCTTTCAGCTTCCTCTTCTTCCTTTGGTCAAGGAATCAATGAGTAAGAAGGGGAAGGAAAAAATGGGTACATCAACAGTATCAGGAGAGCCCAAAAAGGGAAGAAGTGCCTTGGAAGAGCTTCCAGGGGGTTATATGGGCAAAATGCTGGTACACAAAAGTGGAAAAATCAAATTAAAACTAGGAGAAAAATTGTTCGAGGTGTCTCCAGGTTTAAATTGTATATGTCCTCAAGATGTTGTGGCGATGAATACTGCACAGAAAAACTGCTGCGTTCTTGGGGAGCTTAGCAAAAGGGTTGTTGCAACTCCTGATCTTGATTCAATTGATCTGTAA 936 0.4316 MDPNPSSPSRRKMKFKPRKLTPRSKSQSQATETEEQREDRAVEQALLRHLNDLGRREPKVESKSIAQVAFGPVNSSPRLRTYGIGKGGKSSSSSASEYFANEQNSTAIEDQSDSSMIDVTNDTSDASARKIKREYKEPWDYHNSYYPTTLPLRKPYSGDPEILDEEEFGEAATNKEYDENAINSAAELGLLDKSEQQRMLLFQLPLLPLVKESMSKKGKEKMGTSTVSGEPKKGRSALEELPGGYMGKMLVHKSGKIKLKLGEKLFEVSPGLNCICPQDVVAMNTAQKNCCVLGELSKRVVATPDLDSIDL* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00092 311 MobiDBLite consensus disorder prediction 73 118 - -
Rops3g00092 311 MobiDBLite consensus disorder prediction 1 42 - -
Rops3g00092 311 MobiDBLite consensus disorder prediction 86 118 - -
Rops3g00092 311 MobiDBLite consensus disorder prediction 215 239 - -
Rops3g00092 311 PANTHER DNA-DIRECTED RNA POLYMERASE III 1 309 IPR007811 GO:0003677|GO:0005666|GO:0006383
Rops3g00092 311 Pfam RNA polymerase III RPC4 216 305 IPR007811 GO:0003677|GO:0005666|GO:0006383
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00092 Rops-Chr3 1109107 1112669 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00092 K03026 - gmx:100787575 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00092 3 1109107 1112669 Rops3g00092 3 1109107 1112669 ECH