Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00087 ATGGTTCTGTCTCAGAAGCTTCACGAAGCTTTCAAAGGCACTGTAGAGAGGATCACAGGTCCCCGAACCGTTTCTGCCTTCAAAGAAAAAGGGGTTCTCAGTGTCTCCGAGTTCATTCTCGCCGGCGATAATCTCGTAGCTAAATGCCCCACCTGGTCCTGGGAATCGGGTGAGCCAAGCAAGAGGAAGCCATATTTACCACCTGAGAAACAATTCTTAATTACCCGGAATGTGCCTTGTCTACGGAGAGCTGCATCTGTTGAAGAAGAATATGAAGCTGCTGGAGGGGAAGTTCTAGTTGATGATGAAGAAAATGATGGGTGGCTAGCAACTCATGGGAAACCTAAAGAAACCAAATCTGATGAGGATGAGAATTTGCCTTCCATGGAAAGCCTAGAAATCAGCAAAAAGAGTTCTATTAAGCCAATTCATTCCTACATGGGAGGTGGTGAGGAGGAAGAAGATATTCCAGATATGGCAGAGTTTGAAGAAACTGACAACATTATTACAGATCCTGCCACTCTTCAGTCCACATATCTAGTAGCTCAGGAACCTGATGATGATAATATTTTACGAACCCGCACTTACGACGTCAGCATCACGTATGATAAATATTACCAAACACCTCGCGTATGGCTTACTGGGTATGATGAGTCAAGAATGCTTTTGCAACCAGAACTTGTCCTTGAAGATGTTAGTCAAGACCATGCACGCAAAACGGTAACAATTGAGGACCACCCTCACTTGCCTGGGAAGCATGCATCTATTCATCCATGTCGACATGGAGCAGTAATGAAGAAAATCATTGATGTGTTGATGTCACGTGGAGTTGAGCCTGAAGTTGACAAGTACCTATTCTTATTCTTGAAATTCATGGCCTCTGTGATTCCGACAATCGAGTATGATTACACCATGGACTTTGATCTTGGTAGCTCCAGCAATTAA 945 0.4392 MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVAKCPTWSWESGEPSKRKPYLPPEKQFLITRNVPCLRRAASVEEEYEAAGGEVLVDDEENDGWLATHGKPKETKSDEDENLPSMESLEISKKSSIKPIHSYMGGGEEEEDIPDMAEFEETDNIITDPATLQSTYLVAQEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKTVTIEDHPHLPGKHASIHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSN* 315
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00087 314 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 5 308 IPR046962 GO:0019776
Rops3g00087 314 Pfam Autophagocytosis associated protein, active-site domain 37 303 IPR007135 GO:0019787
Rops3g00087 314 Gene3D - 154 299 - -
Rops3g00087 314 MobiDBLite consensus disorder prediction 102 127 - -
Rops3g00087 314 MobiDBLite consensus disorder prediction 105 127 - -
Rops3g00087 314 FunFam Autophagy-related protein 3 162 299 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops3g00087 Rops-Chr3 1082902 1090032 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00087 K08343 - gmx:100787410 575.089