Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00068 ATGTGGAGACGCGCAACCGCTTCATTGAGATCATCCCTTTCCCTTCACATGCGCTTAATCCAGGAAGCTTCTTCTAAACACAACGCTTCTCATTGCCATCGATTTACCACTGGGTTTCCCTTGCATCTGCAGGAAAGGGGTGGGATTTGCCCCAAACATATTCCCCCGTTTATAACTTTCGTTTTAGGGGGTCCTGGTAGTGGAAAAGGTACACAATGTGAAAAAATTGTTGAAACCTTTGGATTTAAGCATCTGAGTGCTGGAGATCTTTTGAGAAGGGAGATTGTTTCTGATAGTGAATATGGCTCAATGATTCTGAATACAATTAGAGAAGGAAAAATTGTGCCATCAGAAGTGACCGTCAAATTGATTCTAAGAGAGATGGAATCTAGTGACAATCATAAGTTTCTTATTGATGGTTTCCCTAGAAGTGAGGAGAACCGCATGGCTTTTGAACAAATTATTGGATCAGAACCAAATATAGTACTTTTCTTTGATTGCCCTGAAGAAGAGATGGTGAAACGGGTGCTAAGCCGTAATCAGGGTCGAATTGATGACAATATAGATACAATAAAGAAACGTCTTAAAGTATTTGAGGCATTAAATCTTCCTGTGGTTGATTATTATGCAAAGAAAGGGAAACTTCACAGGATCAATGCAGTGGGAACAGTAGATGAAATATTTGAGCAAGTTCGGCCGGTTTTTGAGGCGAGCACAAGGCTAAATGAAAGATGTTTGAATGGTTTGAAAGCTTCGTAA 759 0.4018 MWRRATASLRSSLSLHMRLIQEASSKHNASHCHRFTTGFPLHLQERGGICPKHIPPFITFVLGGPGSGKGTQCEKIVETFGFKHLSAGDLLRREIVSDSEYGSMILNTIREGKIVPSEVTVKLILREMESSDNHKFLIDGFPRSEENRMAFEQIIGSEPNIVLFFDCPEEEMVKRVLSRNQGRIDDNIDTIKKRLKVFEALNLPVVDYYAKKGKLHRINAVGTVDEIFEQVRPVFEASTRLNERCLNGLKAS* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00068 252 NCBIfam UMP-CMP kinase family 58 235 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Rops3g00068 252 Hamap Adenylate kinase [adk]. 57 236 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops3g00068 252 PANTHER NUCLEOTIDE KINASE 29 232 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops3g00068 252 CDD ADK 60 227 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops3g00068 252 ProSitePatterns Adenylate kinase signature. 136 147 IPR033690 -
Rops3g00068 252 Pfam Adenylate kinase 61 213 - -
Rops3g00068 252 Gene3D - 54 238 IPR027417 -
Rops3g00068 252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 235 IPR027417 -
Rops3g00068 252 Hamap UMP-CMP kinase [CMPK1]. 56 238 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Rops3g00068 252 PRINTS Adenylate kinase signature 88 102 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops3g00068 252 PRINTS Adenylate kinase signature 60 73 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops3g00068 252 PRINTS Adenylate kinase signature 136 152 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops3g00068 252 PRINTS Adenylate kinase signature 200 214 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops3g00068 252 PRINTS Adenylate kinase signature 183 198 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00068 Rops-Chr3 885645 890258 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00068 K13800 - gmx:100777369 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00068 3 885645 890258 Rops3g00068 3 885645 890258 ECH