Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00058 ATGGAGAAAAGTGCAGAGGCGGAGATTGTGATCGTAGGAGGTGGTATATGCGGCCTTGCAACTGCCCTCGCCCTTCATAGGAAGAGAATTACAAGTTTGGTGTTAGAAAGATCAGACAAGTTGCGAGCTACAGGAGCAGCTATAATCGTGCAGACAAATGGTTGGCGAGCACTTGATCAGCTTGGTGTTGGTTCAGCACTTAGACAAACTGCCATTCAAATACAAAGGGGAAAATTCATACCGCTTGGTAAGGCCGAGCAAAAGGAATTTCCATTTGGGATAGGTCAAGAATTTCGCTGTTTGAAACGTACTGATCTGATCCAAGCCATGGCCGATAGTTTGCCGGAGGGAACTGTACGTACCAGCTGTCAAGTGCTTTCCATTGAATTGGATCCTGTAACTCAGTATCCACAACTTATGCTTAGCAATGGAAGTGTCCTTCGAGCCAAGGTTGTTATTGGATGTGATGGGGTGAATTCTATCATTGCAAATATGTTTGGGTTACACCCAAGGAAGCTCATGCTCTTCTCTACATGTGCTACACGAGGCTTCACAAATTATCCAAATGGTCATCAATTTACCAGTGAGTTTGTTGTTATGAGCAGAGAAAATGTCCAACTCGGAAGAATCCCAGTGACTGACAAACTCGTTTACTGGTTTGTGACAAGGCCTTGGACTTCTCAAGATTCAGTAATTTCAAAAGACCCAGCTCTTATTAGACAATCTGTGATGGAATCAATGAAAGGTTTCCCGGTCCACGCGATGGACATGATACAAAATTCTGAGTTGAATTTCATGCATCTCACAGACTTGAGGTTTCGCCCACCATGGGACTTGCTTCTTAACAACTTCAGGAAAGGTGCAGTAACAATCGCCGGTGACGCAATGCATGCAACTGGCCCTTTCATTGCACAGGGTGGTGCAGCCTCCATAGAAGATGCAATTGTTCTTGCTAGATGCCTGGCACAAAAGATGCATATGCACGGTACTGAGAACGCTAAAAGAGAGCGAAATATCGTAGAGGAAGCACTCGATCAATATGTGAAAGAAAGGAGGATGAGAATCTTTTGGCTCTCTTTGCAGAGTTTCCTTATTGGGAAGAAGCTTGATGCACAATCAATGATAGTGAAATTGGTCATCCTTGGAATCATGGCTATTCTGTTTCGAGACCCAAGTGGGCATACCCACTTTGATTGTGGAACTCTCTAG 1209 0.4433 MEKSAEAEIVIVGGGICGLATALALHRKRITSLVLERSDKLRATGAAIIVQTNGWRALDQLGVGSALRQTAIQIQRGKFIPLGKAEQKEFPFGIGQEFRCLKRTDLIQAMADSLPEGTVRTSCQVLSIELDPVTQYPQLMLSNGSVLRAKVVIGCDGVNSIIANMFGLHPRKLMLFSTCATRGFTNYPNGHQFTSEFVVMSRENVQLGRIPVTDKLVYWFVTRPWTSQDSVISKDPALIRQSVMESMKGFPVHAMDMIQNSELNFMHLTDLRFRPPWDLLLNNFRKGAVTIAGDAMHATGPFIAQGGAASIEDAIVLARCLAQKMHMHGTENAKRERNIVEEALDQYVKERRMRIFWLSLQSFLIGKKLDAQSMIVKLVILGIMAILFRDPSGHTHFDCGTL* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00058 402 Gene3D - 8 377 IPR036188 -
Rops3g00058 402 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 7 402 IPR044560 -
Rops3g00058 402 Pfam FAD binding domain 7 352 IPR002938 GO:0071949
Rops3g00058 402 Coils Coil 330 350 - -
Rops3g00058 402 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 - -
Rops3g00058 402 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Rops3g00058 402 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 - -
Rops3g00058 402 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 - -
Rops3g00058 402 SUPERFAMILY FAD/NAD(P)-binding domain 8 389 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00058 Rops-Chr3 782754 785062 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00058 1 402 Miscellaneous Gene Families AT5G05320 35.000 2.71e-76 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00058 - - mtr:25491818 607.831