Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00054 ATGAAAATCATCCCCAAGGCTCAGTTTAAGTTCAAGGTGCTGCCATCACAGAGGAAGTGGCACAATTACATAGTTTCCTTGTGGCAAGGGCAAGTTGGTGACACCGACGAGTTAAAAAAGATGAGGGGAAAGCCAGCTTCAGGAAAGGCCGTTTTTTTCCTATGCATTGCATGCTTTCTTGCTGGAACACTCTTCGCTGGCCAGATGTGGACACGCCCTTCCAACCATGAAAATGAAGCACTGCCGGCAAAACATGATTGTGATCATAAGCGAAAATTGATTGAAGGCAGACCTACTGATGTAATGGAGGAAGTCACAAAGACCCATCAAGCTATCAAGTCTCTCGATAAGGCTGTTTCATCATTAGAAATGGAACTGACAGCAGCTCGGACAAGCCAAACTGGTGGGCAGCACTTGCGGCATCATGCTTCTAACCACAGTATACAGAAAGCTTTTGTGGTTATTGGTATAAACACAGCCTTCAGTAGCAAAAGGCGAAGAGACTCAATACGCCAAACATGGTTACCTAAAGGAAATCAGCTTAAGGAACTAGAGAAAGAGAAGGGAATTGTTGTAAGGTTCATGATCGGGCATAGCACTACCCCAGGTGGCATTCTTGATAAAGCAATTGATGCAGAAGAGGAAGAACACAAGGACTTTCTCAGGTTAGACCACGTTGAGGGCTACCATGAACTATCCTCAAAGACACGCCTCTTCTTTTCCACTGTTACTTCCATGTGGGATGCTGATTTCTATGTCAAGGTAGACGATGACATCCATTTAAATATAGGTATGCTAGTGAGTACACTTGCTAAGTACCGATCAAGGCCCAGAGTTTATATTGGTTGCATGAAATCTGGTCCAGTTCTATATCAAAAAGGGTTGAAGTATCATGAAGCTGAGCACTGGAAGTTTGGGGAAGAAGGGAACAAGTATTTCAGGCATGCCACTGGCCAAATATACGCCATCTCCAAAGATCTTGCTACCTACATATCCATCAACTGGCCCATATTACACAGATACGCAAATGAAGATGTATCTTTAGGTGCATGGTTATTGGGCCTGGAAGTTGAACATGTCGATGAACGCTCCATGTGTTGCGGAACCCCTCCAGATTGTGATTGGAAGGCAAGGGCGGGAAATGTGTGCGTGGCATCATTTGATTGGTCATGCAGTGGTATCTGTAAGTCGGTGGATAGAATGAAGGATGTACACAAAGCTTGCGGGGAGGGAGATGGAGCTGTTTGGAACGTTGACCTCTAA 1263 0.4489 MKIIPKAQFKFKVLPSQRKWHNYIVSLWQGQVGDTDELKKMRGKPASGKAVFFLCIACFLAGTLFAGQMWTRPSNHENEALPAKHDCDHKRKLIEGRPTDVMEEVTKTHQAIKSLDKAVSSLEMELTAARTSQTGGQHLRHHASNHSIQKAFVVIGINTAFSSKRRRDSIRQTWLPKGNQLKELEKEKGIVVRFMIGHSTTPGGILDKAIDAEEEEHKDFLRLDHVEGYHELSSKTRLFFSTVTSMWDADFYVKVDDDIHLNIGMLVSTLAKYRSRPRVYIGCMKSGPVLYQKGLKYHEAEHWKFGEEGNKYFRHATGQIYAISKDLATYISINWPILHRYANEDVSLGAWLLGLEVEHVDERSMCCGTPPDCDWKARAGNVCVASFDWSCSGICKSVDRMKDVHKACGEGDGAVWNVDL* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00054 420 Gene3D - 141 367 - -
Rops3g00054 420 Pfam Domain of unknown function (DUF4094) 47 132 IPR025298 -
Rops3g00054 420 FunFam Hexosyltransferase 145 366 - -
Rops3g00054 420 Pfam Galactosyltransferase 165 361 IPR002659 GO:0006486|GO:0016020|GO:0016758
Rops3g00054 420 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 116 364 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00054 Rops-Chr3 758064 761320 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00054 40 420 Glycosyltransferase AT1G77810 60.714 7.76e-180 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00054 K20855 - gmx:100776291 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00054 3 758064 761320 Rops3g00054 3 758064 761320 ECH