Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00042 ATGAATTTGAATGCGGCAGCAGCATGGATGGGGATGGGGAGTCCAATTAAGTGCGAGAGTAAGGCGCAGCAGCGTGCATCTTCATCTTCAGTTTCAGTTTGGGTTACGCGGCGGCATCAACAACTTTCCTTTCCTTCTGCTTCTGCTTCTGCTTCTGCTAATGCCTTTGGTCTCCGTGATGACTCTTCCCGATCTCCTTTCACTCCCAACGCCCTCCATTCTCATTCTGATTATGTGATTGTCAAGGCTAAGGCTAAGTTGGAGCCGCTCCATATTATGATTTCAGGGGCTCCCGCTTCTGGTAAAGGAACCCAATGTCAGCTTATCACCAATAAATACGGTTTGGTGCATGTTGCTGCTGGAGATTTGCTTAGGGCTGAAATTGCCACTGGAAGTGAAAATGGAAGGCGAGCTAAAGAATACATGGAGAATGGACAGTTGGTCCCTAACGAAATTGTTGTCATGATGGTCAAGGAGCGTCTCACGAAGCCAGATTCTATAGAGAATGGTTGGCTTTTGGATGGATATCCCAGGAGCTTATCACAGGCTATTGCACTTCACGAATTTGGGTTCCAACCTGATATCTTTATTCTTCTAGAGGTCTCTGAAGATATTCTCGTGGAGAGAGTAGTTGGACGGAGATTAGATCCTGTTACTGGGAAGATATATCACTTGAAGTATTCTCCTCCAGAGACAAAAGAAATCGCAGAAAGGCTTACCCAACGTTTTGATGATACTGAAGAAAAGGTAAAGTTGCGATTGAACACCCATCATCAAAATGTGGAGGCAGTCCTTTCCATGTATAAAGATATAACTATTAAGATTGATGGAAATGTCTCAAAGGAGGAAGTATTTGCTCAAATTGATCGTGCAGTCTCAAGTCTTTTAGAGCAAAGGAAAGCTTCTTCAGGATCTGTGGCAGCATAG 927 0.4423 MNLNAAAAWMGMGSPIKCESKAQQRASSSSVSVWVTRRHQQLSFPSASASASANAFGLRDDSSRSPFTPNALHSHSDYVIVKAKAKLEPLHIMISGAPASGKGTQCQLITNKYGLVHVAAGDLLRAEIATGSENGRRAKEYMENGQLVPNEIVVMMVKERLTKPDSIENGWLLDGYPRSLSQAIALHEFGFQPDIFILLEVSEDILVERVVGRRLDPVTGKIYHLKYSPPETKEIAERLTQRFDDTEEKVKLRLNTHHQNVEAVLSMYKDITIKIDGNVSKEEVFAQIDRAVSSLLEQRKASSGSVAA* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00042 308 PRINTS Adenylate kinase signature 242 257 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops3g00042 308 PRINTS Adenylate kinase signature 93 106 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops3g00042 308 PRINTS Adenylate kinase signature 171 187 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops3g00042 308 PRINTS Adenylate kinase signature 121 135 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops3g00042 308 ProSitePatterns Adenylate kinase signature. 171 182 IPR033690 -
Rops3g00042 308 FunFam Adenylate kinase, chloroplastic 86 297 - -
Rops3g00042 308 Pfam Adenylate kinase 94 270 - -
Rops3g00042 308 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 295 IPR027417 -
Rops3g00042 308 NCBIfam adenylate kinase 92 292 IPR006259 GO:0004017|GO:0005524|GO:0016776
Rops3g00042 308 Gene3D - 86 305 IPR027417 -
Rops3g00042 308 PANTHER NUCLEOTIDE KINASE 64 289 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops3g00042 308 CDD ADK 92 284 IPR000850 GO:0005524|GO:0006139|GO:0019205
Rops3g00042 308 Hamap Adenylate kinase [adk]. 90 293 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00042 Rops-Chr3 639438 642459 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00042 K00939 - gmx:100784319 393.66