LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops3g00040	ATGGCGGAAGGCGAAGAAGAGCGTCGTGGGGTGGAGGCAGCAACCACCCCTGACTCGCTCAAGAACACGCCTTCCAACATTGCCAGATTGGAGGACGTGATCGAACATTCTAAGGCCAGGCACAAGTATCTTGCTCAGACTTCTAGCCCTTCCGATGGCGGTGACGTTCGCTGGTACTTTTGTAAGATCCCTTTGGCCCCCAATGAGTTGGCAGCCTCAGTCCCGAGCACCGAGATAGTGGGGAAGAGTGACTATTTTCGTTTTGGCATGAGAGATTCTCTGGCAATTGAAGCATCTTTCTTGCAGAGAGAGGAAGAATTACTTTCCAGTTGGTGGAGAGAATATGCAGAATGTAGCGAGGGCCCAAAAGAACGACAAAGTTCCAGTGCCAAGTTAGATAAGTATCATAGTGGATCTTTTTTGGGGCATACTCAGTCATCTCAACTATATGAAATTGAGGAAGAGAGAGTTGGCGTCCCTGTAAAGGGAGGACTCTACGAGGTAGATTTGATTAGGAGACACTGTTTCCCTGTTTATTGGAATGGAGAAAATCGACGTGTTCTAAGAGGCCATTGGTTTGCTCGTAATGGGGGCCTCGATTGGCTACCTCTTCGTGAAGATGTTGCAGAACAACTAGAGATTGCATATCGTAGTCAGGTTTGGCATCGGAGAACATTTCAACCGTCAGGACTTTTTGCTGCTCGAGTTAATTTGCAAGGCTCCACCCCAGGCCGGCATGCCCTTTTCACTGGAGAAGATGAGACCTGGGAAGCCTGGCTAAATGTTGATGCTTCTGGCTTTTCTAGTTTTGTTGGTTTTGCTGGAAATGGAATCAAGCTAAGGCGTGGTTACTCCCCATCAAATTCACCAAAACCAACCCAGGATGAATTAAGGCAGCAGAAGGAGGAGGAGATGGATGATTACTGTTCTCAGGTCCCTGTTCGACACCTGGTATTTATGGTTCATGGGATTGGTCAAAGGTTGGAAAAATCTAATTTGGTTGATGATGTGGGCAATTTTCGGCATATTACAGCAAGTCTGGCTGAGCAGCACCTTACTCCACACCAACGTGGCACTCAAAGGGTCCTCTTTATCCCATGCCAGTGGAGGAAAGGTTTGAAGCTGAGTGGTGAAACAGCTGTTGAGAAAATAACTTTGGATGGAGTGCGGGGATTGCGTGTCACACTGAGTGCAACTGTTCATGATGTGTTATACTACATGAGCCCAATTTACTGTCAAGACATAATCGACTCGGTATCCAACCAACTGAATCGATTATATTTGAAGTTTCTGAAAAGGAATCCTGGATATGATGGACAGGTTTCATTATATGGTCATTCTCTGGGAAGTGTCCTCTCATATGATATCCTCTGCCATCAAGATAATCTGTCTGCCCCATTTCCAATGGATTGGATGTATAAGGAACATGGTGAAAAGGAGGAATCACTCCCTGATAAGAAAAATCATTGTTTTCAGCACTCATCAATCAATCAGGATAACACATTTGGAATGGAGAGCCCCTCTGATGAAAAGAAGAGTACAGAGCAGACTTCTTCAGAAATGGAGGCAGAATATTCTGAGGAGTCCTCAGTTTCAGGCCCTATGTTATCAAGTGTACACAAATTTACTGCAGAACCTAACTCTGTGAGGCCAAGTAATGAGGGAGATGGTTCTGAGTTCCTTTCTGATTCTGGTGACATGTTTTCTAAGAAAATGGGCACATTGGATGAGCCTGAGAGCATGAATGTTGGGCTACCGGTGGCTAAGGAAGAGTGTGAGGGTACAAGCAACAAAGATGAAGTAATCAATAAGCTCCGGGAAGAGATTGATACATTGAAAGCCAATCTAGCTGCACTGGAATCATGTTGTGGTGATGGTCATTCCAAAGAAGAGTTACATTCAGTACAACAGTTATCTAAAAAATTACCTCCTATACAAGATGCACCAAAGAGTTATACTCCATATATTAAGTACACAAAGCTTCAATTCAAGGTTGATACATTCTTTGCTGTTGGATCCCCTCTTGGTGTATTTCTGGCACTTCGTAATATCCGGATTGGCATTGGCAGAGGCCAAGAATATTGGGAGCAGGAAAATATAAGTGAAGATATGCCAGCTTGTCGGCAGATGTTCAACATTTTTCATCCCTTTGATCCCGTAGCGTACAGGATAGAACCACTTGTCTGCAAAGAACACATCAGCAAACGCCCTGTTTTGATTCCGTATCACAGAGGAGGAAAAAGGTTGCACATTGGATTTCAGGAATTTACTGAAGATCTAGCAGTTCGCACTCGGGCAATAAAGAATTATATGAAATCTGCAAGGGACAAGGTACTCACAGTTTGTCAATCAGGAAATATGGAGAACATAGAAGGAGAGTGTTCTGAAGAGGAGGAAGAGACATCATACGGATCTTTTATGATGGAGAGGTTGACAGGAAGCAAAACCGGACGAATTGATCACATGCTTCAGGATAAGACCTTTGAGCATCCATATCTGCAAGCCATTGGAGCACATACAAACTATTGGCGGGATTATGATACTGCTCTTTTCATATTGAGACACTTGTATCGAGATATACCAGAAGACCCCAGTTTGTCATGTGTACCTAGCGAGGGCAGCTTGAAACATGAGAGTAGTTCTGCTGGTTGGTATGATCAAAGAGACACTGTTGAGGAAGATCTTCCTTTGACTTTCTCTGACAAGGTTATGGCCAGAAACTTCTCAAGCAAAGCTAATAAGATGCTGCATAAGAACGCTGCATCTTTCTAA	2772	0.4405	MAEGEEERRGVEAATTPDSLKNTPSNIARLEDVIEHSKARHKYLAQTSSPSDGGDVRWYFCKIPLAPNELAASVPSTEIVGKSDYFRFGMRDSLAIEASFLQREEELLSSWWREYAECSEGPKERQSSSAKLDKYHSGSFLGHTQSSQLYEIEEERVGVPVKGGLYEVDLIRRHCFPVYWNGENRRVLRGHWFARNGGLDWLPLREDVAEQLEIAYRSQVWHRRTFQPSGLFAARVNLQGSTPGRHALFTGEDETWEAWLNVDASGFSSFVGFAGNGIKLRRGYSPSNSPKPTQDELRQQKEEEMDDYCSQVPVRHLVFMVHGIGQRLEKSNLVDDVGNFRHITASLAEQHLTPHQRGTQRVLFIPCQWRKGLKLSGETAVEKITLDGVRGLRVTLSATVHDVLYYMSPIYCQDIIDSVSNQLNRLYLKFLKRNPGYDGQVSLYGHSLGSVLSYDILCHQDNLSAPFPMDWMYKEHGEKEESLPDKKNHCFQHSSINQDNTFGMESPSDEKKSTEQTSSEMEAEYSEESSVSGPMLSSVHKFTAEPNSVRPSNEGDGSEFLSDSGDMFSKKMGTLDEPESMNVGLPVAKEECEGTSNKDEVINKLREEIDTLKANLAALESCCGDGHSKEELHSVQQLSKKLPPIQDAPKSYTPYIKYTKLQFKVDTFFAVGSPLGVFLALRNIRIGIGRGQEYWEQENISEDMPACRQMFNIFHPFDPVAYRIEPLVCKEHISKRPVLIPYHRGGKRLHIGFQEFTEDLAVRTRAIKNYMKSARDKVLTVCQSGNMENIEGECSEEEEETSYGSFMMERLTGSKTGRIDHMLQDKTFEHPYLQAIGAHTNYWRDYDTALFILRHLYRDIPEDPSLSCVPSEGSLKHESSSAGWYDQRDTVEEDLPLTFSDKVMARNFSSKANKMLHKNAASF*	924

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops3g00040	923	SMART	DDHD_2a	661	858	IPR004177	GO:0046872
	Rops3g00040	923	MobiDBLite	consensus disorder prediction	282	303	-	-
	Rops3g00040	923	Coils	Coil	595	622	-	-
	Rops3g00040	923	MobiDBLite	consensus disorder prediction	496	580	-	-
	Rops3g00040	923	ProSiteProfiles	DDHD domain profile.	661	858	IPR004177	GO:0046872
	Rops3g00040	923	MobiDBLite	consensus disorder prediction	519	559	-	-
	Rops3g00040	923	Pfam	DDHD domain	812	857	IPR004177	GO:0046872
	Rops3g00040	923	Pfam	DDHD domain	661	777	IPR004177	GO:0046872
	Rops3g00040	923	SUPERFAMILY	alpha/beta-Hydrolases	403	477	IPR029058	-
	Rops3g00040	923	PANTHER	PA-PL1 PHOSPHOLIPASE FAMILY	23	865	-	-
	Rops3g00040	923	MobiDBLite	consensus disorder prediction	1	24	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops3g00040	15	918	Acyl Lipid Metabolism Gene Families	AT1G31480	62.446	0.0	1155

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops3g00040	-		-	aprc:113864311	1604.34