Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g00018 ATGGCGAAATCGGAGAATTCAGAGGGGGCGAGCAAGAATATTAAGAATAAGAATATGGCTTCAACGTCAACATCAATATCTTCGTCGGCAAAAGTTCATCCTTCCAATGATCCTGAACTGGTTCCCGATTCTTACGCCCTCGAGAAGTTCAAACTCTACGAAACCAGAGCGAGGTTTTACCTGATCGGGAGTGATCGGAACAAGAGGTTCTTCCGGGTGTTGAAGATTGATCGATCAGAGCCGTCCGATCTGAATATAAGCCAAGACCCTGTTTTATACTCTCCCCAAGAAATCAAGAGCTTGCTTCAGCGTATTGCTGAAGGTAACAGGGCCACTGGCGGCCTCACTTTCGTCGCTAAGGTCTTTGGGATTGCCGGCTGCATCAAGTTTCTCGAGTCCTATTATTTGATTCTCGTTACTAAGCGCAGACAAATTGGTTCTATATGTGGTCATGCAATCTATAGCATCAAGGAGAGCCAATTGATTACCATTCCACATGTTTCCATTCAATCTGATTTAGCTCACTCTAAAACTGAGCTCAGATACAAAAAGCTTCTGTCCAGTGTTGATTTGACCAAGGATTTTTTCTTTAGTTACACTTACCCTATAATGCAAAGTCTGCAAAAAAACGTCTTGTCCAATCAAGAAGGAGGGATGCCATATGATAATATATTTGTTTGGAATGCTTACTTAACACAATCGATCAGATCAAGATGCAACAACACCATTTGGACTATAGCTTTAGTTCATGGCCATTTTAGGCAGATTCGCCTATCAATCTTTGGGAGGGACTTCAGTGTTTCCTTGATTTCTAGACGATCTAGACATTTTGCCGGGACACGGGAAGGATTGAAGGAGGAGGAGCAACAAACCAGTTACTTAAAAAGGGGAGTGAATGATCGAGGGAGGGTTGCTAATGATGTTGAGACAGAGCAGATTGTCCTTGATGAGGAAGCTGGCTCTTGCAAGGGAAAAATGAGTTCAGTTGTGCAGATGCGTGGATCAATACCGCTTTTTTGGTCACAAGAAGCATCAAGATTTAGCCCTAAGCCTGACATAATCTTGCAGAGGTATGATCCAACATACCAGGCAACAAAATTGCATTTTGAAGACCTTGCTAAGAGATATGGCAACCCAATTATTGTTCTTAATTTGATTAAGACAGTTGAGAAACGGCCTCGAGAAATGATGCTGAGACGTGAATTTGCAAATGCTGTTGGGTATCTGAACCAAATTCTACCGGTAGAGAACCATCTTAGATTTATCCACTGGGACTTTCACAAGTTTGCAAAAAGCAAGTCTGCCAATGTGCTGGCAGTTTTAGGAGCTGTAGCAAGTGAAGCACTTGATTTAACAGGTTTTTACTACAGTGGAAAACCCAACATCATAAAGAGAGCCAACAAAAGCAATCGAACAAGCACAGGGAGGGATACTTCGCTGAGAGATCTGAGAGCTAGTTCTGGGGATCTTGCGAGGATTGGAAACAGTAGTGAAATGCTAAATTCTATGGTTAATCGAGATAAAGAGACTGACATGAACCAGCAGAACAAAAAAGATAATTTTAGTAGTGATGTGCCACATTTTCAGAGTGGAGTTCTTCGTACCAACTGCATTGACTGCTTGGACCGTACAAATGTCGCCCAGTATGCTTATGGTCTTCAAGCTTTAGGGCGCCAGCTCCATGCAATGGGTTTGACTGATGTGCCAAAAGTGGATCCTGATAGTAGTATTGCTGCAGCTTTAATGGATATGTATCAAAGTATGGGAGATGCTCTTGCCCAGCAGTATGGTGGTTCTGCAGCTCACAATACTGTGTTTCCAGAGAGGCAGGGAAAGTGGAAAGCAACAACACAGTCAAGAGAGTTTTTAAAATCCATAAAACGATACTATAGCAATGCTTACACGGATGGTGAAAAACAAGATGCAATAAACTTATTTTTAGGTTATTTCCAACCACAGGAAGGGAAACCTGCTCTCTGGGAGCTTGATTCAGATTATTACCTCCATGTATCCGGGATTGGGGATGATCTAATCCCTGAGAATTGTTCTGAACCAAATCTTGAGCCTTCTGGAAGAGCTGGAATGGTCTTCGCCCCTATACCGGCTTGCAGAGATGACTTCTCACGCATAAAGTTGACATCATTTGACAAGTTAATTGAAAAGACCTGTAGTACAATTAAAAACGTAAGACTTTGCTGTGAACCTGATCAGAGACCAGGTGGTGGTTCTGGAACCAGTGGTGTAGCACCTGATGCAGCTGAGATACAGCTTAAAAGCCCAAATTGGCTTTTTGGCCAGAGAAAGCATGAAGAAGATTCCTCTGCTGCAAAAGTTGCTTCTCGTGAAATTGACATTGAAGGATCTCATGCCAATGACATTTGCAACTTGAACTGGCTTTCCTCTGGCAATGATATGAATGAAGAGGATGTTTTCCAAAGGTACCTGACAATGACCTCAGCAGATGAGGCAAACGGTTGGTATGGAGGTACTCTCCTTGGTGATCAAGATGAAAGCAGTGAGATATATAAACATTATGCTGAGTTATGTCAGGGACCTGCCTTGGAACTTTTCCAAAATGATTCTGAGAGAGAGCAACACTATGCGGATGCTCTAAGCATGAGTTCATTTGAAGTTGTTAATGATGCTGCAGTTGCAGCAGAAATGGAAGCAGCTCTAAAGGAGTATGACCAAGTTGGTGCTGACCTTGGGATAATTCCCACATCTTGTAAATTCTTTGCTGATGATCCAAGTTGGTTGACGAGGTGGTTAATTGGGGAAGAAAAAGTACCAAGGATATGA 2799 0.4252 MAKSENSEGASKNIKNKNMASTSTSISSSAKVHPSNDPELVPDSYALEKFKLYETRARFYLIGSDRNKRFFRVLKIDRSEPSDLNISQDPVLYSPQEIKSLLQRIAEGNRATGGLTFVAKVFGIAGCIKFLESYYLILVTKRRQIGSICGHAIYSIKESQLITIPHVSIQSDLAHSKTELRYKKLLSSVDLTKDFFFSYTYPIMQSLQKNVLSNQEGGMPYDNIFVWNAYLTQSIRSRCNNTIWTIALVHGHFRQIRLSIFGRDFSVSLISRRSRHFAGTREGLKEEEQQTSYLKRGVNDRGRVANDVETEQIVLDEEAGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYQATKLHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFANAVGYLNQILPVENHLRFIHWDFHKFAKSKSANVLAVLGAVASEALDLTGFYYSGKPNIIKRANKSNRTSTGRDTSLRDLRASSGDLARIGNSSEMLNSMVNRDKETDMNQQNKKDNFSSDVPHFQSGVLRTNCIDCLDRTNVAQYAYGLQALGRQLHAMGLTDVPKVDPDSSIAAALMDMYQSMGDALAQQYGGSAAHNTVFPERQGKWKATTQSREFLKSIKRYYSNAYTDGEKQDAINLFLGYFQPQEGKPALWELDSDYYLHVSGIGDDLIPENCSEPNLEPSGRAGMVFAPIPACRDDFSRIKLTSFDKLIEKTCSTIKNVRLCCEPDQRPGGGSGTSGVAPDAAEIQLKSPNWLFGQRKHEEDSSAAKVASREIDIEGSHANDICNLNWLSSGNDMNEEDVFQRYLTMTSADEANGWYGGTLLGDQDESSEIYKHYAELCQGPALELFQNDSEREQHYADALSMSSFEVVNDAAVAAEMEAALKEYDQVGADLGIIPTSCKFFADDPSWLTRWLIGEEKVPRI* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g00018 932 ProSiteProfiles Sac phosphatase domain profile. 186 598 IPR002013 GO:0016791
Rops3g00018 932 MobiDBLite consensus disorder prediction 1 37 - -
Rops3g00018 932 MobiDBLite consensus disorder prediction 1 34 - -
Rops3g00018 932 Pfam SacI homology domain 122 429 IPR002013 GO:0016791
Rops3g00018 932 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 31 871 IPR043573 GO:0043813|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g00018 Rops-Chr3 352144 379380 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g00018 1 932 Acyl Lipid Metabolism Gene Families AT1G22620 74.573 0.0 1462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g00018 K22913 - gmx:100800092 1681