Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05004 ATGACGGTGGTCTCACTGTTCCTCGCCGCCACGAAACTCGCCGGAGCTCTGGTGACTCTCAGCGTCGCCGCCAATGCCTTCTCATTCTCTCGTTTCCGTAAGAAGAACCTTCGCCCCTTCCGTTCCCCTATCGATGAATCCTCCGACACTCTCGCCACTTTCAACGTTTCCGAAGGAGAAAATGGGTTTTTCTTTGGTTTGGCTACAGCACCAGCACATGTTGAGGATAGGCTTGATGATGCTTGGATTCAGTTTGCTGAAGAGAAGAATGGAAGTGGTGATGGTGTTGAGGTTAAGCAGGGAGTGGATGCTTTGATGGCTTCTGCTGCTGGTGATGGTGGGTCCCAAGCTCCATCATCTCCATATAAACAAGTTAACAAGGGGAAGAAGCCTCTTAAGGTTGCTATGGAGGCCATGGTTAGAGGATTTGAGAAGTTCACGGAAGTAGAGGGGCAAGAAGGAGTGGAAGAAGAACACCAGCCAAATGTAACTGCTTGGCATAATGTTCCACACCCGGAGGAGAGGTTAAGGTTTTGGTCTGATCCTGATACAGAACTAAAATTGGCCAAGGATACTGGTGTTACTGTTTTTCGCATGGGAATAGATTGGTCAAGAATCATGCCAGTGGAACCAGTAAACAGCCTTAAAGAATCTGTTAACTATGCTGCGTTGGAGCGTTATAAGTGGATTATCAATAGGGTTCGATCATGTGGAATGAAGGTGATGCTCACTCTTTTTCATCACTCACTCCCACCCTGGGCTGGTGAGTATGGAGGTTGGAAGCTGGAAAAGACAGTGGATTATTTCATGGACTTTACCAGGCTTGTTGTAGACACTGTATCAGATTTAGTAGATTATTGGGTAACATTTAATGAGCCCCATGTCTTCTGCATGCTTACCTATTGTGCTGGAACTTGGCCTGGTGGTCATCCTGATATGCTGGAGGCTGCTACTTCTGCACTTCCAACTGGTGTTTTCCAGCAGGCCATGCATTGGATGTCTATTGCACACTCAAAGGCATATGATTACATCCATGAACTGAGTAACTCATTAAATCCAATAGTTGGTGTAGCACATCATGTGTCGTTTATGCGACCCTATGGTCTGTTTGATGTTGCTGCTGTTACACTGGCTAATCAATTGACTATCTTCCCATACATCGATGGAATATCTGACAAGCTGGACTTTATAGGCATAAATTACTATGGGCAGGAAGTGGTTTCCGGTGCTGGCCTGAAACTGGTGGAAAATGATGAGTACAGTGAATCTGGTCGTGGGGTATATCCTGATGGCTTATATCGCATGTTGCTTCAGTTTCATGAAAGATACAAGCATGTCCCCTTCATCATTACTGAAAATGGGGTTTCCGATGAGACAGATTTGATCCGCCGGCCATATCTCTTGGAGCATTTGCTTGCTGTTTATGCAGCCATGATCATGGGTGTGCCCGTGCTTGGTTACTTGTTCTGGACTATTTCTGACAACTGGGAGTGGGCTGATGGCTATGGTCCCAAGTTTGGACTTGTTGCGGTTGATCGGACAAATAATCTTGCAAGGATCCCCCGCCCCTCTTACCATCTATTTTCCAAAATTGTGAATAGCGGAAAAGTTACACGTGAAGATCGTGAAGGAGCATGGGATGAACTCCAAAGAGCTGCTAATGAGAAGAAAACAAGGCCATTTTATCGGGCTGTGGACAAACATGGTTTAATGTATGCAGGTGGACTTGATGAACCTATACTGCGACCTTATGTTGAACGAGATTGGCGGTTTGGTCATTATCAGATGGATGGTCTTCAGGATCCCTTGAGCCGCTTCTCAAGATTCATTATTCGACCGTTCTCCCTGAAAAGGAAAACAAAACCTCAAAAGAAGAATCCCAAATTAGTTCTTCAGCCTCTTGAATTTAGCAATTGA 1917 0.4549 MTVVSLFLAATKLAGALVTLSVAANAFSFSRFRKKNLRPFRSPIDESSDTLATFNVSEGENGFFFGLATAPAHVEDRLDDAWIQFAEEKNGSGDGVEVKQGVDALMASAAGDGGSQAPSSPYKQVNKGKKPLKVAMEAMVRGFEKFTEVEGQEGVEEEHQPNVTAWHNVPHPEERLRFWSDPDTELKLAKDTGVTVFRMGIDWSRIMPVEPVNSLKESVNYAALERYKWIINRVRSCGMKVMLTLFHHSLPPWAGEYGGWKLEKTVDYFMDFTRLVVDTVSDLVDYWVTFNEPHVFCMLTYCAGTWPGGHPDMLEAATSALPTGVFQQAMHWMSIAHSKAYDYIHELSNSLNPIVGVAHHVSFMRPYGLFDVAAVTLANQLTIFPYIDGISDKLDFIGINYYGQEVVSGAGLKLVENDEYSESGRGVYPDGLYRMLLQFHERYKHVPFIITENGVSDETDLIRRPYLLEHLLAVYAAMIMGVPVLGYLFWTISDNWEWADGYGPKFGLVAVDRTNNLARIPRPSYHLFSKIVNSGKVTREDREGAWDELQRAANEKKTRPFYRAVDKHGLMYAGGLDEPILRPYVERDWRFGHYQMDGLQDPLSRFSRFIIRPFSLKRKTKPQKKNPKLVLQPLEFSN* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05004 638 SUPERFAMILY (Trans)glycosidases 153 539 IPR017853 -
Rops2g05004 638 ProSitePatterns Glycosyl hydrolases family 1 active site. 448 456 IPR018120 -
Rops2g05004 638 PRINTS Glycosyl hydrolase family 1 signature 481 498 IPR001360 GO:0004553|GO:0005975
Rops2g05004 638 PRINTS Glycosyl hydrolase family 1 signature 460 471 IPR001360 GO:0004553|GO:0005975
Rops2g05004 638 PRINTS Glycosyl hydrolase family 1 signature 505 517 IPR001360 GO:0004553|GO:0005975
Rops2g05004 638 PRINTS Glycosyl hydrolase family 1 signature 393 407 IPR001360 GO:0004553|GO:0005975
Rops2g05004 638 PRINTS Glycosyl hydrolase family 1 signature 448 456 IPR001360 GO:0004553|GO:0005975
Rops2g05004 638 PANTHER GLYCOSYL HYDROLASE 162 383 IPR001360 GO:0004553|GO:0005975
Rops2g05004 638 Pfam Glycosyl hydrolase family 1 183 368 IPR001360 GO:0004553|GO:0005975
Rops2g05004 638 Pfam Glycosyl hydrolase family 1 389 534 IPR001360 GO:0004553|GO:0005975
Rops2g05004 638 Gene3D Glycosidases 145 545 - -
Rops2g05004 638 MobiDBLite consensus disorder prediction 619 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05004 Rops-Chr2 89794728 89812587 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05004 4 611 Glycoside Hydrolase AT3G06510 64.087 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05004 K21362 - gmx:100792401 1107.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05004 2 89794728 89812587 Rops2g05004 2 89794728 89812587 ECH