Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05003 ATGGGATGGTTGTACCTGTTAATGGGATTTCATGTATTATGCTTATCTTTCCAGACAGGCACAAGAATCCAAATGACTCAGCTTTCTAATATATGCTACCCTCACAATGGAAAGATCAAGACCAGGGAATTTCTTGCTTATTGGAAAAGGAAGAGAATTGCACTGAGTCTCAGTGGGGTCCGAACTTGGAATCTTCAGTCAAGTTCCATCATGAGAGCATTGAGTGCTGAACTCTCTGGAATCTCAACAACTTCGAGGGCTGTCTGGTTCATGAAAGCATCAGAATTAAATGTGGGAACCTATGAAGCTGATAGAATAATTGATCTTCCTGGGCAACCTTCAACTCCTTCAGTCTCACACTTTTCAGGTTACATCACTGTCAATGAAGACCATGGGAGGGCCCTTTTCTACTGGTTCTTTGAAGCTCAATCTGAACCCTCCAACAAGCCTCTCCTTCTTTGGCTCAATGGAGGACCTGGATGCTCCTCTATTGGTTATGGTGCAGTTGTTGAGATAGGACCTCTTACAGTTAACCAAAATGGTGAAGGATTACATTTCAACCCCTACTCCTGGAATCAAGAAGCAAATTTGTTATTTGTGGAGTCCCCTGTTGGAGTTGGTTTTTCTTACACTAACACATCCTCTGATTTGACCATATTGGAGGATAATTTTGTGGCTGAGGATGCCTACAATTTCTTGGTGAACTGGCTACAAAAATTCCCACAGTTCAAATCCCGGGACTTTTATATAGCAGGAGAAAGCTATGGAGGCCACTATATCCCTCAGCTTGCAGAGTTAGTCTTTCATCGGAACAAAGATAGAAACACATACCCCTTTATTAATCTTAAAGGTTTTATTGTAGGGAATCCAGAAACTGAAGATTACTATGACTATAAAGGCCTGCTGGAATATGCATGGAGCCATGCAGTTATATCAGACCAGCTATATGACCAAGCAAAACAAGTATGTGATTTTAAACAATTCCAATGGTCAAATGAATGCAATAAGGCCATGAATGAAGTCTTCCAAGATTACTCAGAAATTGACATATACAACATTTATGCCCCGAAATGTCATGTAAATAGCACATCCTCAATGGCTCATGATAGTAATAACAACGGCCCTGAATCACTCACAAAGGTGAGAAATGATTATAGAATAAGGAGGATGAGAATTTTTGGGGGCTATGACCCATGTTTTTCCAATTATGCAGAAGAATATTTCAATAGGATAGATGTCCAGTCATCTTTTCATGCAAATAATATAAGAGGAAACACTAATGTACCATGGAAGGTTTGCAATAATTCCATCTTGCGGACTTACAACTTCTCTGTTTTCTCGGTCCTACCCATCTACACCAAACTCATCAAGGGTGGGCTTAAGATATGGATTTACAGTGGAGATGCAGATGGCAGAGTACCAGTGATAGGGACACGATACTGTATTGAAGCTCTTGGATTACCTCTCAAATCTAGTTGGCGAACTTGGTACCATGATGATCAGGTTGGAGGAAGGATAGTGGAATATGAAGGGTTGACATTTGTGACAGTGAGAGGAGCTGGTCATTTGGTGCCTCTCAACAAGCCTAGTGAGGCTCTCTCTCTCATTCATTCTTTCATAACAGGCCATCCTCTCCCTACTCGTACATGA 1650 0.4109 MGWLYLLMGFHVLCLSFQTGTRIQMTQLSNICYPHNGKIKTREFLAYWKRKRIALSLSGVRTWNLQSSSIMRALSAELSGISTTSRAVWFMKASELNVGTYEADRIIDLPGQPSTPSVSHFSGYITVNEDHGRALFYWFFEAQSEPSNKPLLLWLNGGPGCSSIGYGAVVEIGPLTVNQNGEGLHFNPYSWNQEANLLFVESPVGVGFSYTNTSSDLTILEDNFVAEDAYNFLVNWLQKFPQFKSRDFYIAGESYGGHYIPQLAELVFHRNKDRNTYPFINLKGFIVGNPETEDYYDYKGLLEYAWSHAVISDQLYDQAKQVCDFKQFQWSNECNKAMNEVFQDYSEIDIYNIYAPKCHVNSTSSMAHDSNNNGPESLTKVRNDYRIRRMRIFGGYDPCFSNYAEEYFNRIDVQSSFHANNIRGNTNVPWKVCNNSILRTYNFSVFSVLPIYTKLIKGGLKIWIYSGDADGRVPVIGTRYCIEALGLPLKSSWRTWYHDDQVGGRIVEYEGLTFVTVRGAGHLVPLNKPSEALSLIHSFITGHPLPTRT* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05003 549 PRINTS Carboxypeptidase C serine protease (S10) family signature 187 199 IPR001563 GO:0004185|GO:0006508
Rops2g05003 549 PRINTS Carboxypeptidase C serine protease (S10) family signature 200 210 IPR001563 GO:0004185|GO:0006508
Rops2g05003 549 PRINTS Carboxypeptidase C serine protease (S10) family signature 236 261 IPR001563 GO:0004185|GO:0006508
Rops2g05003 549 PRINTS Carboxypeptidase C serine protease (S10) family signature 512 525 IPR001563 GO:0004185|GO:0006508
Rops2g05003 549 Gene3D alpha/beta hydrolase 100 360 IPR029058 -
Rops2g05003 549 Gene3D - 448 542 - -
Rops2g05003 549 FunFam Carboxypeptidase 100 360 - -
Rops2g05003 549 Gene3D - 399 437 - -
Rops2g05003 549 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 107 529 IPR001563 GO:0004185|GO:0006508
Rops2g05003 549 FunFam Carboxypeptidase 448 542 - -
Rops2g05003 549 ProSitePatterns Serine carboxypeptidases, histidine active site. 512 529 IPR033124 GO:0004185
Rops2g05003 549 ProSitePatterns Serine carboxypeptidases, serine active site. 250 257 IPR018202 GO:0004185
Rops2g05003 549 Pfam Serine carboxypeptidase 110 541 IPR001563 GO:0004185|GO:0006508
Rops2g05003 549 SUPERFAMILY alpha/beta-Hydrolases 106 546 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05003 Rops-Chr2 89789534 89795237 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05003 419 545 Calmodulin-binding Proteins AT2G22960 32.031 4.37e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05003 K16297 - gmx:100792930 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05003 2 89789534 89795237 Rops2g05003 2 89789534 89795237 ECH