Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04993 ATGAACCCATTATTAACCCTTATCTTGTTCACTCTTGTTGTTGTAATGCCAATAAGTAACTGCAGAATCATCCATCAAAAAAACGATGCCAATCTGATAGAAAAAACTTGCAAGCAGACACCATACTATGACCTTTGTGTTCAATACCTCAAAGCTGACCCTAGAAGCTCTAATGCAAATGTCACAGGACTAGCACAAATCATGGTTGGTATAATGCAAACCAAATCAGACGATGCAATGTGGGGAATCCATATACTACTGCGTAAAGGGGCCCCTGAAAAGGAAGCATTGGATTCATGTTATTTCAGATACACAGCAATTTTAGAAGCTGATGTGCCACAAACCATTGCTGCTCTTCAGAAAGGGTACCCTGAGTTAGCACAAAGTGGTGCAACATGTGCTGGCCTTGAAGTTACTACTTGTGAAAGCTACTTCACTGGGAAATCATCACCCATCACAGATTACAACATTCATGCTCGTGAAGCAGCAATCCTAGCATCATATATTATCGGACAATTGCACAAATAA 528 0.4034 MNPLLTLILFTLVVVMPISNCRIIHQKNDANLIEKTCKQTPYYDLCVQYLKADPRSSNANVTGLAQIMVGIMQTKSDDAMWGIHILLRKGAPEKEALDSCYFRYTAILEADVPQTIAALQKGYPELAQSGATCAGLEVTTCESYFTGKSSPITDYNIHAREAAILASYIIGQLHK* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04993 175 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 173 IPR035513 -
Rops2g04993 175 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 173 IPR035513 -
Rops2g04993 175 CDD CIF_like 30 173 IPR034087 GO:0004857|GO:0043086
Rops2g04993 175 Pfam Plant invertase/pectin methylesterase inhibitor 31 157 IPR006501 GO:0004857
Rops2g04993 175 SMART PMEI_2 28 169 IPR006501 GO:0004857
Rops2g04993 175 NCBIfam pectinesterase inhibitor domain 2 173 IPR006501 GO:0004857
Rops2g04993 175 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04993 Rops-Chr2 89689462 89689989 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04993 - - gmx:100306719 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04993 2 89689462 89689989 Rops2g04993 2 89689462 89689989 ECH