Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04974 ATGATAGTTATCGAAAATATATATTTTATTAATAGACATGAAAATACACAAACTTTATTGCTCACTTCCTTGTTCTCTGTTAACGAGGTTAAATCACCAAGTTGTCGTCTGAATCATTTCTGTGGCCCTCGTAGCCTTTCTGCCCCTGACTTAGGCCTCTTAAGCTTTGGTCAACTATCCCCTGATTCTAATAGTGTGGGGCCTACCTCGCTAACAAGAGAGATTAATAGCGAGTCTGGTGGGAATTCTTTGGATGACGTCTGTGCTGGTAGGAGTAATTGTCTTGGTGGGGAGTCACTCTTTGGGCTGGGTGTTGCCCAAAACACACTCGGGCCCAACATGCCCCTTGAATTGGGCTGGACCAATGACTATAAGATGGCTGACTACAATTGTTGTGAGGCTTTCACTTTAGTTTCTCCACATGCGGAGACAGTAAAATCTAACGATGTTGATGGGGGAGGTGGTTTTGGTAAGGGTATTCCTTTCTGGGTAAGTCGTACCCATGAACTGAGTTCACCTTCTTCTGAGGATAGTTCAGCATCAGCTCCTCTGCTTCCTCTCAAATCCAAAGGGTCATTGACCTCCTCTGTTCCGTCTTTTTATGCTACACCAGATATTTGCAAGCAAGCGGGGTATGTTCGTTCATCCTGGTCTAGAATGTCCCCTTCAACTTCAAAGGTCAATCCGCCACGTCTTTCAGATGCCAACAATCGGGGTCATGGTCACTCATCCAATAACATTGGGCAAAGTGCCCGATCTCACTATTGTAATGCCTCCTCCGCTGATCGATCTTCAGAGTTGCAAGTGGGGGAAAAAAGTGAACGATTGGAGGAGATGAGCACCTTCAGGCGCTTCGACGTCGTTTCAGATCATTCAGATCACCGCCTTCTAGAGTCATACCATGTCAAAATCAAAGATGGTGGAGACTGCTTCACAAATTCAAAGAGTAAGGTGTACAAGAGCATCATGAGAGAGTGGAAAATCCTAGAGCAAAACTTACCTGAATCCATCTATGTTCAGGTCTATGAGCGTCGAATCGATTTGATGAGGGCTGCGATTGTAGGTGTTGCCGGCACACCTTATCACGATGGTCTCTTCTTCTTTGACATTGCATTCCCATCTGATTACCCTAATCAGCCACCCATGCTCCATTTCCTTTCATTTGGTTTACGGCTTAACCCTAATCTCTATGATAATGGCAAAGTATGCTTGAGTCTCCTCAATACATGGTTCGGAATCATTCTCACCGAGAAGCCATTGTTCAATGATCCCCTTTTTGGCAAGTTGGGTTTCGAGAGCATGTCACGTTCCTACAACGAGCTTGTGTTCATGAACACTTGTTATCTTTCTCGCTACCTCATCCAAAACCCTCCCAGGAACTTCGAACCGTTGGTCAGAGGCCACTATCAGGAACGAGCATTTGTGATTCTCACGGCCTGCAACGAGTACGTGAATGGGCGTGTGAAAATTGGGTATTACAATTGCAATAATGGATCGTCTTCGTCGACCGAGAAAGTTTCGAAGGCGTTCAAGGGGCATATGGAAAGGTGTTACCCTGAGATGGTTAGAGCGTTTACAGAGTGCGGTGCTTCTTTGGAGACTTCCATGGAACGCTTGGAGTTGCAAGCGGAGCGATCCAAAAGCCACAACGATGGAAACTTCAAGAAAGCCATGGCGAAGATCAAACGGGCTTTAGGATGGAAAGGGAGAGATCATTGTCATGAAAGTGCTTCAAGATAA 1740 0.4557 MIVIENIYFINRHENTQTLLLTSLFSVNEVKSPSCRLNHFCGPRSLSAPDLGLLSFGQLSPDSNSVGPTSLTREINSESGGNSLDDVCAGRSNCLGGESLFGLGVAQNTLGPNMPLELGWTNDYKMADYNCCEAFTLVSPHAETVKSNDVDGGGGFGKGIPFWVSRTHELSSPSSEDSSASAPLLPLKSKGSLTSSVPSFYATPDICKQAGYVRSSWSRMSPSTSKVNPPRLSDANNRGHGHSSNNIGQSARSHYCNASSADRSSELQVGEKSERLEEMSTFRRFDVVSDHSDHRLLESYHVKIKDGGDCFTNSKSKVYKSIMREWKILEQNLPESIYVQVYERRIDLMRAAIVGVAGTPYHDGLFFFDIAFPSDYPNQPPMLHFLSFGLRLNPNLYDNGKVCLSLLNTWFGIILTEKPLFNDPLFGKLGFESMSRSYNELVFMNTCYLSRYLIQNPPRNFEPLVRGHYQERAFVILTACNEYVNGRVKIGYYNCNNGSSSSTEKVSKAFKGHMERCYPEMVRAFTECGASLETSMERLELQAERSKSHNDGNFKKAMAKIKRALGWKGRDHCHESASR* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04974 579 MobiDBLite consensus disorder prediction 218 266 - -
Rops2g04974 579 SUPERFAMILY UBC-like 312 457 IPR016135 -
Rops2g04974 579 Gene3D Ubiquitin Conjugating Enzyme 269 534 IPR016135 -
Rops2g04974 579 Pfam Ubiquitin-conjugating enzyme 322 410 IPR000608 -
Rops2g04974 579 CDD UBCc 319 424 IPR000608 -
Rops2g04974 579 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 202 530 - -
Rops2g04974 579 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 317 474 IPR000608 -
Rops2g04974 579 MobiDBLite consensus disorder prediction 218 272 - -
Rops2g04974 579 SMART ubc_7 320 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04974 Rops-Chr2 89458836 89465289 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04974 282 530 Miscellaneous Gene Families AT2G33770 42.909 1.47e-62 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04974 K10581 - gmx:100810844 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04974 2 89458836 89465289 Rops2g04974 2 89458836 89465289 ECH