Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04963 ATGAACACGCTCCATTCTCCTCCATCTTCTTCTTCTAACTTCACTCTTTTCACACCCAACTACCTCTTCAAGTTCACACTGAAAATACCCATTTTACCCCTCCACTCTTCCTCTTCCCATCTCACTGCACCTGCACCTGCACCATGTTGCTCTCTCAGGGACTCATCAACCACGATGTTGGAAAAAAATACCCTTTCCTCCGAAAAGGGTCCCCGCAATGACGTTCAACCAAAAGACTCAAACTTTGAAGGAGGGCTAGTGGTTCGCCGGCCGGTGATGGAGTTTTCCGGCGAAGACGCCGATGAGGAGGAAGAAAAAAAGGAGACAGATGAAGATGATGACACGAAGGGTTCTGCGATCGATGCCGGGCTCACGAGATTTGCGAAGAAGATGCCAATTTTTGAGCCAGAGAGGGTTGAATCAGATTCTAAAGAGAAGCCACTGGGTGTGAATTTGGACTTGGCTTTATATAAAGCGAAGGTTTTGGCTAGAAAATTTAAGTATGAAGAAGCAGAGGAAATACTTGAGAAGTGTATATGCTATTGGCCGGAAGATGGTAGAGCTTATGTGGCACTTGGGAAGATTTTGAGTAAGCAATCAAAAACGGGTCAAGCTAGAGAGATATATGAGAAGGGTTGCCAGGCTACTCAGGGTGAAAATGCCTACATTTGGCAGTGCTGGGCTGTTCTTGAAAAGAAAATGGGAAATATCAGGAGAGCAAGAGAGCTTTTTGATGCTGCCACGGTTGCTGATAAGAAGCATGTTGCTGCTTGGCATGGATGGGCAGTTCTAGAATTAAAGCAGGGAAATATAAAGAAGGCAAGGAATCTGCTTGTCAAAGGTCTTAAATATTGTGGACAGAATGAGTACATATACCAAACACTTGCATTGCTTGAAGCTAGAGCAAATAGATATCAGCAGGCTCGATATTTATTCAATCAGGCCACTAAGTGTAATCCTAACAGCTGTGCTAGTTGGCTTGCTTGGGCTCAAATGGAGGTGGAACAGGAAAACTACCGTGCTGCTAGGCAATTGTTTGAGAAAGCAGTACAGGCAAGTCCTAAAAATAGGTTTGCTTGGCATGTATGGGGCATTTTTGAGGCTAACACGGGCAACATTGACAAGGGAAGAAAACTTCTAAAGATAGGCCATACTCTAAATCCAAGGGATCCTGTTCTCCTTCAGTCTCTTGCATTATTAGAATACAAATACTCTACTGCAAACCTTGCTCGGGTTTTGTTCAGGAGAGCATCTGAATTGGATCCAAGGCATCAACCTGTTTGGTTTGCTTGGGGTTGGATGGAGTGGAAAGAAGGGAACTTGAATACAGCTAGAGAATTATACCAAAAAGCTTTATCAATTGATCCAACCAGTGAAACTGCTGCCAGGTGTCTCCAGGCTTGGGGTGTTCTGGAGCAAAGGGTTGGCAATCTTTCAGCTGCCCGTAGATTATTTAGATCCTCATTGAATATAAATTCTCAGAGTTATGTTACATGGATGACTTGGGCATCACTGGAAGAAGATCAAGGAAATCCTGTGCGTGCTGAAGAGATTCGTAATCTTTATTTCCAGCAGCGCACGGAAGTTGTGGATGATGCTTCATGGGTCATGGGATTCTTAGATATTTTAGACCCTGCCATTGATAGTTTGAAGAGACTTCTCAAGCTGGAATCAAATTCGTACAACATGCTACCAGATTCTTTGAAAAATATAACAGGAACAAATAAAAACAGGGTTGATTTTCCAAGTGACAATGATGATAATGATGTGGACAGTGAGAGTGAATTTGATTTGGATGCTTTCGTTATGGAAAGGTTGTCCTTAGATTCGTCCAATCTAGAAGTTCAGTTGGGAACACCAAAAATTCCTTCTATGAAAAAGAGTCTCTCTCCTAGAAGGATATGGCGACCAAATAATAGAATTGCCAAAGTGTAG 1935 0.4289 MNTLHSPPSSSSNFTLFTPNYLFKFTLKIPILPLHSSSSHLTAPAPAPCCSLRDSSTTMLEKNTLSSEKGPRNDVQPKDSNFEGGLVVRRPVMEFSGEDADEEEEKKETDEDDDTKGSAIDAGLTRFAKKMPIFEPERVESDSKEKPLGVNLDLALYKAKVLARKFKYEEAEEILEKCICYWPEDGRAYVALGKILSKQSKTGQAREIYEKGCQATQGENAYIWQCWAVLEKKMGNIRRARELFDAATVADKKHVAAWHGWAVLELKQGNIKKARNLLVKGLKYCGQNEYIYQTLALLEARANRYQQARYLFNQATKCNPNSCASWLAWAQMEVEQENYRAARQLFEKAVQASPKNRFAWHVWGIFEANTGNIDKGRKLLKIGHTLNPRDPVLLQSLALLEYKYSTANLARVLFRRASELDPRHQPVWFAWGWMEWKEGNLNTARELYQKALSIDPTSETAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYVTWMTWASLEEDQGNPVRAEEIRNLYFQQRTEVVDDASWVMGFLDILDPAIDSLKRLLKLESNSYNMLPDSLKNITGTNKNRVDFPSDNDDNDVDSESEFDLDAFVMERLSLDSSNLEVQLGTPKIPSMKKSLSPRRIWRPNNRIAKV* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04963 644 Pfam Tetratricopeptide repeat 295 356 - -
Rops2g04963 644 Pfam Tetratricopeptide repeat 233 281 - -
Rops2g04963 644 ProSiteProfiles TPR repeat profile. 289 322 IPR019734 GO:0005515
Rops2g04963 644 SUPERFAMILY TPR-like 167 404 IPR011990 GO:0005515
Rops2g04963 644 SMART hat_new_1 476 508 IPR003107 GO:0006396
Rops2g04963 644 SMART hat_new_1 235 267 IPR003107 GO:0006396
Rops2g04963 644 SMART hat_new_1 166 198 IPR003107 GO:0006396
Rops2g04963 644 SMART hat_new_1 303 335 IPR003107 GO:0006396
Rops2g04963 644 SMART hat_new_1 337 369 IPR003107 GO:0006396
Rops2g04963 644 SMART hat_new_1 200 233 IPR003107 GO:0006396
Rops2g04963 644 SMART hat_new_1 371 403 IPR003107 GO:0006396
Rops2g04963 644 SMART hat_new_1 439 474 IPR003107 GO:0006396
Rops2g04963 644 SMART hat_new_1 269 301 IPR003107 GO:0006396
Rops2g04963 644 SMART hat_new_1 405 437 IPR003107 GO:0006396
Rops2g04963 644 SMART tpr_5 255 288 IPR019734 GO:0005515
Rops2g04963 644 SMART tpr_5 425 458 IPR019734 GO:0005515
Rops2g04963 644 SMART tpr_5 323 356 IPR019734 GO:0005515
Rops2g04963 644 SMART tpr_5 221 254 IPR019734 GO:0005515
Rops2g04963 644 SMART tpr_5 462 495 IPR019734 GO:0005515
Rops2g04963 644 SMART tpr_5 152 185 IPR019734 GO:0005515
Rops2g04963 644 SMART tpr_5 186 219 IPR019734 GO:0005515
Rops2g04963 644 SMART tpr_5 391 424 IPR019734 GO:0005515
Rops2g04963 644 SMART tpr_5 289 322 IPR019734 GO:0005515
Rops2g04963 644 ProSiteProfiles TPR repeat profile. 323 356 IPR019734 GO:0005515
Rops2g04963 644 FunFam PsbB mRNA maturation factor Mbb1 392 542 - -
Rops2g04963 644 SUPERFAMILY TPR-like 354 524 IPR011990 GO:0005515
Rops2g04963 644 Pfam Tetratricopeptide repeat 427 457 IPR013105 -
Rops2g04963 644 Gene3D Tetratricopeptide repeat domain 140 284 IPR011990 GO:0005515
Rops2g04963 644 MobiDBLite consensus disorder prediction 58 118 - -
Rops2g04963 644 ProSiteProfiles TPR repeat profile. 425 458 IPR019734 GO:0005515
Rops2g04963 644 Gene3D Tetratricopeptide repeat domain 285 526 IPR011990 GO:0005515
Rops2g04963 644 PANTHER PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107 39 639 IPR044624 GO:0003729|GO:0006397
Rops2g04963 644 FunFam High chlorophyll fluorescent 107 143 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04963 Rops-Chr2 89217097 89222373 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04963 - - vun:114175850 957.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04963 2 89217097 89222373 Rops2g04963 2 89217097 89222373 ECH