Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04946 ATGGGGCGTGACATAGATGAATTGCCAAAGAACGCGGCGAACTACACAGCTTTGACGCCGTTATGGTTCTTAGAAAGAGCAGCTCAAGTGCACCCTAACAGAAAATCTGTGATCCATGGATCTCGTCATTACACGTGGCAACAAACTTACCACCGTTGCCGTCGATTCGCTTCCGCTCTTTCTAACCGTTCCATCGGTCTCGGAAACACTGTAGCTGTTATAGCACCCAATGTTCCAGCTCTTTGTGAAGCTCATTTTGGGATTCCAATGGCAGGGGCTGTGTTGAACCCTGTTAATATTAGGTTAAATGCATCCACCATAGCTTTTCTTCTTGGTCATTGTGAAGCAGCAGCTGTAATTGTTGATCAAGAGTTCTTTTCATTGGCAGAAGAAGCTTTGAAAATATGGTCTGAGAAAGCCAAAACCAACTTCAAGCCTCCAAATTTAATTGTCATTGGTGATGAAAACTGTGACCCTAAGGCACTTAGATATGCTTTGGGCAAAGGGGCCATTGAATATGAGGATTTTCTTCAAAGTGGTGACCCTGAATATGCATGGAAACCCCCAGAAGATGAGTGGCAGAGCATTGCTTTGGGTTATACATCTGGTACCACTTCTAGTCCCAAAGGTGTGGTGTTACATCACCGTGGAGCATATCTCATGTCTCTAAGTGGAGCTCTTATATGGGGTATGACTGAAGGAGCTGTATATCTTTGGACACTACCAATGTTTCATTGTAATGGTTGGTGCTACAGTTGGACACTTGCTGCTCTCTGTGGTACTAACATATGCCTTCGCCAGGTATCAGCTAAGGCAGTATATGAAGCCATTGCTAAGTACAAAGTGACTCATTTTTGTGCAGCACCAGTGGTGCTTAACACAATAATCAATGCCCCACCTGAGGATACCATACTTCCTCTACCCCATGTTGTACATGTCAATACAGCAGGGGCTGCTCCTCCTCCTTCTGTTCTTGCTGGCATGTCTCAACGAGGATTTCGTGTTACACACACTTATGGTCTCTCAGAAACCTTTGGCCCCTCTGTCTATTGTGCTTGGAAACCAGAATGGGACTCACTTCCCCCTGAAACCCAAACCAAGCTCCATGCAAGACAAGGGGTTAGGTACATTGGCTTGGAAGGTCTGGATGTTGTGAACACAATAACCATGGAACCTGTCCCTGCAGATGGTAAAACCATTGGTGAGATTGTGATGAGGGGTAATGTTGTGATGAAAGGCTACTTAAAGAACCCTAAAGCTAACCAAGAGAGCTTTGCAAATGGATGGTTTCATTCAGAGGATCTTGCTGTAAAGCATCCAGATGGGTATATAGAAATTAAAGACAGATCAAAGGACATCATCATCTCTGGTGCTGAAAATATCAGCAGTGTAGAGATAGAGAATACTTTGTACTCACATCCTGCAATACTTGAGACATCAGTGGTTGCAAGGCCAGATGAGAAATGGGGTGAGTCTCCCTGTGCTTTTGTGACATTAAAGCCAGGAGTGGATAATAGTAATGAACAACGTTTAGTTGAGGATATAATTAAGTTCTGCAGGGCTAAAATGCCTCCTTATTGGGTCCCAAAATCAGTTGTATTTGGACCATTACCTAAGACTGCTACTGGGAAAATACAGAAGCATTTGCTGAGGGCCAAGGCAAAAGAGATGGGACCAGTCAAGATGAGCAGGTTGTAA 1698 0.4417 MGRDIDELPKNAANYTALTPLWFLERAAQVHPNRKSVIHGSRHYTWQQTYHRCRRFASALSNRSIGLGNTVAVIAPNVPALCEAHFGIPMAGAVLNPVNIRLNASTIAFLLGHCEAAAVIVDQEFFSLAEEALKIWSEKAKTNFKPPNLIVIGDENCDPKALRYALGKGAIEYEDFLQSGDPEYAWKPPEDEWQSIALGYTSGTTSSPKGVVLHHRGAYLMSLSGALIWGMTEGAVYLWTLPMFHCNGWCYSWTLAALCGTNICLRQVSAKAVYEAIAKYKVTHFCAAPVVLNTIINAPPEDTILPLPHVVHVNTAGAAPPPSVLAGMSQRGFRVTHTYGLSETFGPSVYCAWKPEWDSLPPETQTKLHARQGVRYIGLEGLDVVNTITMEPVPADGKTIGEIVMRGNVVMKGYLKNPKANQESFANGWFHSEDLAVKHPDGYIEIKDRSKDIIISGAENISSVEIENTLYSHPAILETSVVARPDEKWGESPCAFVTLKPGVDNSNEQRLVEDIIKFCRAKMPPYWVPKSVVFGPLPKTATGKIQKHLLRAKAKEMGPVKMSRL* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04946 565 FunFam 2,3-dihydroxybenzoate-AMP ligase 451 558 - -
Rops2g04946 565 CDD ttLC_FACS_AEE21_like 15 552 - -
Rops2g04946 565 FunFam Long-chain-fatty-acid--CoA ligase FadD 5 451 - -
Rops2g04946 565 Pfam AMP-binding enzyme C-terminal domain 465 544 IPR025110 -
Rops2g04946 565 SUPERFAMILY Acetyl-CoA synthetase-like 12 556 - -
Rops2g04946 565 Gene3D - 4 451 IPR042099 -
Rops2g04946 565 Pfam AMP-binding enzyme 24 456 IPR000873 -
Rops2g04946 565 ProSitePatterns Putative AMP-binding domain signature. 198 209 IPR020845 -
Rops2g04946 565 Gene3D - 452 560 IPR045851 -
Rops2g04946 565 PANTHER ACYL-ACTIVATING ENZYME 9 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04946 Rops-Chr2 89001551 89005101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04946 3 565 Miscellaneous Gene Families AT3G16910 75.666 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04946 K01913 - gmx:100808187 1068.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04946 2 89001551 89005101 Rops2g04946 2 89001551 89005101 ECH