Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04719 ATGCCAAAGTTTGTTTCTGAGCTGAGACCACATGCTTATGGTTCCCTTTTAGGAACATTGAAAATGGCTGACTTGTTGGAATGGCCTAAGAAAGATAAACGCCGTTTGCTCCATGTCGTTTATCGTGTTGGTGACCTTGATCGCACCATCAAGTTTTACACTGAATGTTTTGGAATGAAGCTTTTGAGGCAAAGAGATATTCCGGAGGAGAAATATGCCAATGCTTTTCTTGGATTTGGCCCTGAAGAATCCCATTTTGTTGTTGAATTAACATACAATTATGGAGTGAGCTCGTATGACATTGGAGATGGCTTTGGACATTTTGCAATTGCAACTCAAGATATTTACAAATTGGTTGAACACATCCGGGCCAAGGGTGGAAACATCACTAGGGAGCCTGGTCCAGTTCAGGGGGGAACAACTGTTATTGCCTTTGTGAAGGATCCTGATGGTTACACTTTTGGACTCATCCAAAGACCTATAGTTCATGACCCATTTTGTCAAATAATGCTTCGTGTTGGTGATCTAGAACGCGCAATTAAGTTTTATGAAAAGGCTTTGGGCTTGAAGGTGTTGAGGAAGGTTGATAGGCCCGAGTACAAGTACACTGTGGCTATTCTTGGGTATGCAGATGAGCACGAGACAACTGTTTTGGAGTTGACATATAATTATGGTGTCACTGAATACTCTAAGGGAACTGCTTATGCACAGATTGCTATTGGAACTGATGACGTATACAAGAGTGCTGAGGTAGTTAACCAAGTCACACAAGAGCTTGGAGGGAAGATTACTCGCCAGCCAGGGCCAATTCCCGGCCTTAACACAAAAGTCACTGCTTTTTTAGATCCAGATGGATGGAAAACTGTCATGGTTGACAATGAAGATTTCCTAAAGGAACTGAAGTGA 906 0.4238 MPKFVSELRPHAYGSLLGTLKMADLLEWPKKDKRRLLHVVYRVGDLDRTIKFYTECFGMKLLRQRDIPEEKYANAFLGFGPEESHFVVELTYNYGVSSYDIGDGFGHFAIATQDIYKLVEHIRAKGGNITREPGPVQGGTTVIAFVKDPDGYTFGLIQRPIVHDPFCQIMLRVGDLERAIKFYEKALGLKVLRKVDRPEYKYTVAILGYADEHETTVLELTYNYGVTEYSKGTAYAQIAIGTDDVYKSAEVVNQVTQELGGKITRQPGPIPGLNTKVTAFLDPDGWKTVMVDNEDFLKELK* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04719 301 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 35 159 IPR037523 -
Rops2g04719 301 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 166 289 IPR029068 -
Rops2g04719 301 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 165 293 IPR037523 -
Rops2g04719 301 Gene3D - 18 159 IPR029068 -
Rops2g04719 301 ProSitePatterns Glyoxalase I signature 1. 38 59 IPR018146 GO:0004462|GO:0046872
Rops2g04719 301 FunFam Lactoylglutathione lyase 32 163 - -
Rops2g04719 301 PANTHER LACTOYLGLUTATHIONE LYASE 21 300 - -
Rops2g04719 301 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 169 286 IPR004360 -
Rops2g04719 301 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 36 154 IPR004360 -
Rops2g04719 301 Gene3D - 162 301 IPR029068 -
Rops2g04719 301 ProSitePatterns Glyoxalase I signature 1. 168 189 IPR018146 GO:0004462|GO:0046872
Rops2g04719 301 FunFam Lactoylglutathione lyase 164 301 - -
Rops2g04719 301 NCBIfam lactoylglutathione lyase 35 159 IPR004361 GO:0004462|GO:0046872
Rops2g04719 301 CDD GlxI_Ni 36 157 - -
Rops2g04719 301 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 34 160 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04719 Rops-Chr2 85545849 85558235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04719 168 292 Calmodulin-binding Proteins AT1G08110 28.000 9.49e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04719 K01759 - gmx:100793089 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04719 2 85545849 85558235 Rops2g04719 2 85545849 85558235 ECH
Rops11g01047 11 15379654 15384298 Rops2g04719 2 85545849 85558235 ECH
Rops2g04719 2 85545849 85558235 Rops11g01047 11 15379654 15384298 PCT