Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04345 ATGGATCAGTTGTCGGCGATCAGCGAGGACCTGGCGGAGATCGACGGACACGTCGCCGACAATTTCCGCGCATTATCAAATGGGTTTCAGAAGTTGGAGAAGATTAAGGATTCAAGTAGGCAAAGCAGGCAGTTGGACGAACTCACAGAGAAAATGCGAGACTGTAAACGGCTTATTAAAGAGTTCGATAAAGAAGTCAAAGCTTTGGAGGGTAACTTTGATAGAGAAACAAACAAAATGTTGAATGAGAGAAAGCAGTCAATGATCAAAGAGCTAAATTCATATGTTGCTTTGAAAAAGCAATATGCTACAAAGTTTGAGAATAAGCGAATTGAGCTCTTTGAGGGGCCCAATGAAGGTTATGCGGAAGAAAATGTCTTGCTAGCTTCCTCAATGACAAATGAACAGCTAATGGATCGTGGGAATAGGATGATGGATGACACAGATCAAGCCATTGAGAGGGGAAAGAAGGTTGTTCAAGACACAATAAATGTTGGTACAGAGACTGCAGCAGCTCTTAAGGCTCAGACGGAACAAATGAGCAGAGTTGTCAATGAGCTGGATTCTATCCATTTCTCTTTAAAGAAAGCCTCTAAATTGGTCAAGGAAATCGGTAGGCAGGTTGCTACTGACAAGTGTATTATGGCATTGCTTGTCCTTATTGTCATTGGAGTAATTGCTATCATTATTGTAAAGCTTGTGCACCCAAACAACAAGGACATTCGCGACATTCCAGGATTAGCTCCTCCAGTAGTTATGAACCGAAGACTGCTTTGGAGTCACAGATACAGATGA 795 0.4214 MDQLSAISEDLAEIDGHVADNFRALSNGFQKLEKIKDSSRQSRQLDELTEKMRDCKRLIKEFDKEVKALEGNFDRETNKMLNERKQSMIKELNSYVALKKQYATKFENKRIELFEGPNEGYAEENVLLASSMTNEQLMDRGNRMMDDTDQAIERGKKVVQDTINVGTETAAALKAQTEQMSRVVNELDSIHFSLKKASKLVKEIGRQVATDKCIMALLVLIVIGVIAIIIVKLVHPNNKDIRDIPGLAPPVVMNRRLLWSHRYR* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04345 264 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 142 204 IPR000727 -
Rops2g04345 264 Pfam Sec20 150 225 IPR005606 GO:0005484|GO:0006890
Rops2g04345 264 CDD SNARE_SNAP25N_23N_29N_SEC9N 139 203 IPR044766 GO:0005484|GO:0031201
Rops2g04345 264 FunFam novel plant SNARE 11 133 212 - -
Rops2g04345 264 Gene3D - 133 212 - -
Rops2g04345 264 Coils Coil 45 79 - -
Rops2g04345 264 SUPERFAMILY SNARE fusion complex 132 205 - -
Rops2g04345 264 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 25 231 - -
Rops2g04345 264 SMART tSNARE_6 137 204 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04345 Rops-Chr2 79225938 79230483 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04345 K08494 - gmx:100786429 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04345 2 79225938 79230483 Rops2g04345 2 79225938 79230483 ECH