Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04254 ATGGCTTCAAAATCAAAAGCTAAAGCTCTATTCTTCATCTTGGAGATATTCATGTTGATTATTCTGCCACCAACAATACATGCTTGTGGTCAATGCACTCAGCCACATCCACCCTGCCACCACCGACCGAAACATCCGCCGCATCATGGAGGAGGCCGGCCAAAAGTGTCCCCTCCTCTTCCGCCAGTCATTGTCACACCTCCGATCATATACCCACCTCCACATGGTGTGTTTCCTCCTCCTCCACCACGGACTTGCCCCATTGATGCCCTAAAACTGGGGCTTTGTTTGGATGTGCTTGGAGGCCTTGTGCATATTGGAATAGGGAACCCAATAGAGAATGTGTGCTGTCCAGTGATCCAAGGATTACTTGATCTTGAAGCAGCAATTTGTCTTTGCACCGTTATTAGGTTGAAGGTTCTCAACCTCAACATATTCATTCCTCTTGCACTTCAAGTCCTAATAACTTGTGGGAAGACTCCTCCTCCTGGTTTTGTTTGTCCACCTCTTTAA 513 0.4717 MASKSKAKALFFILEIFMLIILPPTIHACGQCTQPHPPCHHRPKHPPHHGGGRPKVSPPLPPVIVTPPIIYPPPHGVFPPPPPRTCPIDALKLGLCLDVLGGLVHIGIGNPIENVCCPVIQGLLDLEAAICLCTVIRLKVLNLNIFIPLALQVLITCGKTPPPGFVCPPL* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04254 170 Gene3D - 85 169 IPR036312 -
Rops2g04254 170 PANTHER - 6 167 - -
Rops2g04254 170 SMART aai_6 86 167 IPR016140 -
Rops2g04254 170 CDD HPS_like 85 167 IPR027923 -
Rops2g04254 170 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 88 169 IPR036312 -
Rops2g04254 170 Pfam Hydrophobic seed protein 85 168 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04254 Rops-Chr2 77529275 77529787 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04254 85 169 Acyl Lipid Metabolism Gene Families AT4G22490 34.118 5.22e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04254 - - gmx:100807391 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04254 2 77529275 77529787 Rops2g04254 2 77529275 77529787 ECH