Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04252 ATGATGAATTCTTCTAGATCTTCAACTCTTGCTCTCTTTTTCTCCATCAATTTGCTTTTTTTTGTCCTAGCAAGTAGCTGCTACACTTGTCCACAGCCTAAGCCAAACCCAAACCCAAACCCATTTTCTTTTCCAAACCCAAGTCCTGCATCCCAGAGCTGTCCTAGAGATGCACTCAAGCTGGGAGTATGTGCCAATGTGCTTAATGGACCAATTGGTGCAGTGGTGGGGTCACCACCAGACCACCCATGTTGCTCAGTGTTAGAAGGACTTCTTGATCTTGAAGTTGCGGTTTGTCTCTGCACTGCTATCAAAGCTAACATTCTTGGCATTCACCTTAACATCCCCATTTCACTGAGCTTGATCCTTAATGCCTGTGAGAAAACTCCCCCCTCTGACTTCCAGTGTGCCTAA 414 0.4565 MMNSSRSSTLALFFSINLLFFVLASSCYTCPQPKPNPNPNPFSFPNPSPASQSCPRDALKLGVCANVLNGPIGAVVGSPPDHPCCSVLEGLLDLEVAVCLCTAIKANILGIHLNIPISLSLILNACEKTPPSDFQCA* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04252 137 Gene3D - 51 137 IPR036312 -
Rops2g04252 137 SMART aai_6 54 136 IPR016140 -
Rops2g04252 137 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 56 136 IPR036312 -
Rops2g04252 137 Pfam Hydrophobic seed protein 54 137 IPR027923 -
Rops2g04252 137 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Rops2g04252 137 PANTHER - 7 136 - -
Rops2g04252 137 CDD HPS_like 52 136 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04252 Rops-Chr2 77447966 77448379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04252 40 136 Acyl Lipid Metabolism Gene Families AT4G22490 38.144 1.04e-13 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04252 - - gmx:100305616 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04252 2 77447966 77448379 Rops2g04252 2 77447966 77448379 ECH