Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04174 ATGGGTGTTTGGTGGTGGAGGATGCTTTTTGCTGCTCTTGCTTGGATTCTCTTGTCTCCTGAACATTGTGTTTCCCAGAAAGATCCGGAGTATACATTTATGCACCCTGCAACCACCGCAGCAGACATCTCATACTACGATTACATCGTAATTGGCGGCGGAACAGCAGGGTGTCCTTTAGCAGCTACCCTGTCCCAAAAGTACAGTGTGTTGCTGCTTGAACGTGGTGGCTCACCCTATGGCAACCCCAACATCACCAACTTAGCAGCCTTCGGTGCTGCCCTCTCAGACACGTCACGTACCTCTCCCTCTCAGCGTTTCATCTCCCAAGATGGCGTCATTAACTCTAGAGCTCGCGTGCTTGGTGGCGGAAGCAGTTTGAATGCTGGCTTCTACACTCGCGCTAGCCCTCATTATGTAAGGGAAGCGGGTTGGGATGGAAGGTTAGTGAATGAGTCGTACCAATGGGTGGAGAAGGTGGTGGCGTTTGAGCCACAAGTTAAGCAGTGGCAAACAGCTGTGCGGGATGGACTATTGGAGATAGGGGTGGTGCCTAATAATGCCTTCACTTATGATCATATTTATGGGACTAAGGTTGGGGGCACCATCTTTGACCAGTATGGTTACAGGCATACTGCTGCTGATCTTTTGCAATATGCAAACCCCGCTGGAATTACTGTGCTTTTGCATGCCACCGTGCATAGGATCTTGTTTAGAATGAAAGGGGTATCAAGGCCAAGGGCCCATGGAGTTGTGTTCAGGGATGCATCGGGGCGTAAGCACAAAGCATACCTAAAGCCCGGGTCCAGGAACGAGATAATTGTCTCAGCTGGTGCACTTGGAAGCCCACAGCTTCTAATGTTAAGTGGAATTGGACCAGCACATCACCTTAAAGCCCATAAAATTAGTGTAACATTGGACCAGCCATTGGTAGGACAAGGAATGTCAGACAACCCCATGAATGCTATATTTGTCCCATCTCCTGTCCCTGTAGAGGTCTCTCTCATTGAGGTGGTTGGCATCACCAACTTTGGCAGCTACATTGAAGCTGCAAGTGGTGAAAACTTTGCTGGTGGTTCCCCAAAAGACTACGGAATGTTCTCCCCCAAGATTGGTCAACTCTCCACGGTGCCCCCAAAGCAAAGGACCCCAGAAGCTCTAGCAAAAGCAATAGAATCGATGGAGACTCTTGACAACGCAGCGTTCAGAGGAGGATTCATTCTAGAGAAAGTCACAGGTCCAATTTCAACAGGCCATTTGGAGCTCCGAAACCGTGATCCAAATGAGAACCCGTTAGTGACCTTCAACTACTTCCAGGACCCACGAGACTTAGAGAGATGCGTGCAAGGCCTTAGCACCGTGGAGAAGATTATTGAGTCCAAGGCTTTCTCTCCATTCAGATACAAAAACATGCCATTGTCCATGCTACTCAACATTACTGCAAGTTCCCCTGTGAACTTGTTGCCTAAACACACGAATAGCTCATTGTCCCTTGAACAGTTCTGCAAAGACACTGTGATGACCATATGGCATTACCATGGAGGGTGCCAAGTTGGGAAAGTTGTTGACAGGGACTATAAGGTTCTTAGTGTGGATGCACTACGTGTTATCGATGGTTCAACATTTAACGATTCTCCAGGAACTAATCCTCAGGCCACTGTTATGATGCTTGGCAGATATATGGGAGTCCAAATATTGAGAGAGAGACTTGCTGCTGCTGAATCAGATTAA 1731 0.4818 MGVWWWRMLFAALAWILLSPEHCVSQKDPEYTFMHPATTAADISYYDYIVIGGGTAGCPLAATLSQKYSVLLLERGGSPYGNPNITNLAAFGAALSDTSRTSPSQRFISQDGVINSRARVLGGGSSLNAGFYTRASPHYVREAGWDGRLVNESYQWVEKVVAFEPQVKQWQTAVRDGLLEIGVVPNNAFTYDHIYGTKVGGTIFDQYGYRHTAADLLQYANPAGITVLLHATVHRILFRMKGVSRPRAHGVVFRDASGRKHKAYLKPGSRNEIIVSAGALGSPQLLMLSGIGPAHHLKAHKISVTLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIEVVGITNFGSYIEAASGENFAGGSPKDYGMFSPKIGQLSTVPPKQRTPEALAKAIESMETLDNAAFRGGFILEKVTGPISTGHLELRNRDPNENPLVTFNYFQDPRDLERCVQGLSTVEKIIESKAFSPFRYKNMPLSMLLNITASSPVNLLPKHTNSSLSLEQFCKDTVMTIWHYHGGCQVGKVVDRDYKVLSVDALRVIDGSTFNDSPGTNPQATVMMLGRYMGVQILRERLAAAESD* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04174 576 Gene3D - 163 508 - -
Rops2g04174 576 Pfam GMC oxidoreductase 46 319 IPR000172 GO:0016614|GO:0050660
Rops2g04174 576 PANTHER OSJNBA0019K04.7 PROTEIN 15 570 - -
Rops2g04174 576 PIRSF Alcohol_oxidase 23 576 IPR012132 GO:0050660
Rops2g04174 576 SUPERFAMILY FAD-linked reductases, C-terminal domain 315 515 - -
Rops2g04174 576 SUPERFAMILY FAD/NAD(P)-binding domain 45 568 IPR036188 -
Rops2g04174 576 ProSitePatterns GMC oxidoreductases signature 2. 278 292 IPR000172 GO:0016614|GO:0050660
Rops2g04174 576 Pfam GMC oxidoreductase 414 559 IPR007867 GO:0016614
Rops2g04174 576 Gene3D - 46 558 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04174 Rops-Chr2 76000601 76007343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04174 3 569 Miscellaneous Gene Families AT5G51950 58.362 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04174 - - gmx:100796752 1015.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04174 2 76000601 76007343 Rops2g04174 2 76000601 76007343 ECH