Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04164 ATGGCGAGGCCCAATCAAGAGGCGATTGAGACATTCGTCAGCATCACCGGCTTATCTGAAGCAGTAGCACTGCAAAAACTCGAGGAGCATGGTGGTAATCTTAATGAAGCCATTAATGCACATTTTAGTGAAGGAGACAGAAATTTGATGAGCAGCTCTCATGATGGTTCCACTGCAGCTGCTCAAGATGATTTCATGGATATAGATGATCAACTTAATGCTGAAATTCACAGACCTCCTTCACTTTTATCTTTAGCGAGAAATCTCAATCCGTTTTCTCTTCTTGATCCTACAGTTGGGAGAAGTATATTTGATACTCGTCTTGATTCTACAAACCCAGCCCCATTTGTTACGCATCCAAGAGAGGTTAGGGAAATTCCTATAGAGGTTAAGGACAGTGATCAATCCGCTCCTCAAGCTGGCCATCTTCCAACTATTGAAGATGTCACTGGAACTGTTCATGCCCATGGTCCAGAGATCCATGGGAATGTCATAATCGATGATAAAGATGATGACGATACTCTACCTTCTCAGACCAATACTTCGGTTGACCATAGTTCCAGACCTAGTGCTCCCCAGTCTGAGAATTTGCCAGATTATAGCAATAATGACATAGAAGAAGAAATGATTCGTGCAGCCATTGAAGCATCTAAACAGGAGGCTGAGGAAAATTACAGAAATCACAAAATTGGCAAACAAATTGACTTAAGTGAATCCGGGCCTCAGCCAAGGCAATCTTATTTTGAGGATCCTGAGCTTGCCCATGCAGTTTCGTTGTCCCTGAAGACAGCTGAGCAAGAAAAAGCCCAGCATCTACAAGGAGGAGATTTTAGAGCACCAACAGCAGGGCCATCTAAGGCTTTGGAGGCTGAATTAGGGGAAGTGACATCAAATGGAAGATTGCAGGCAGGAAGCTCATCCTTTAAAGATGAAGCTGTAGAGGCACAGCCTCTAGTTAGGAACAGGTCTAGACATATGTCGTTGGGCTCCACAGGATCAGGCAAAGATGTTGAATTTATTGAAGCTAGCACGCTGCCAAGCACAACACTGCAGGATAGCAATAATCCTCCTCGGCAGGATGAAATTTCCGTCCACTCTGATGAATGGGGTGGTATTTCTTCAGAGGAGCATGATGAAGCAGTAATGCTTGAGGCTGCAATGTTTGGTGGAATCCCAGAAGGGAGTAGGTATCGCCATGCTTATGCTCCACGTGAGTTCATGCAGAATAGGGGTTTCAATCCTCGGCCCTCGCATCCTGCATATCGCCCACCTTCACCATCATTGGAAGCTCAGCGCTTGATAAGGGAACAGCAGGATGATGAATATCTTGCATCATTACTAGCAGACAAAGAAAAAGAATTGAAGGCCATGGAGGAAGCTGAGGCTGCTCGTGAAGAGGAAAGGCAGAAAGCAGAAGAATCTCGCAAGAAGTTGCAGGAAGAGCAGGAATCGGAAAAACAGTTAGCAGCCAAAGAAGTCTCTCTTCCACCAGAACCATCCTCAGATGATGATAATGCTGTGACCTTGCTGGTAAAAATGCCAGATGGCAGCCGTCGTGGACGCCGATTCCTAAAATCTGATAACCTACAGTCTCTTTTCGACTTCATAGATATTGGCAGGGCAGTGAAACCAGGCAGTTACAGACTGGTGAGACCATATCCTCGGCGTGCCTTTAGTGTTGAAGAAAGTGCTGCGACACTGGATGAACTTGGCCTTACCAACAAGCAAGAAGCTTTGTTTTTGGAGTTAATCTGA 1755 0.453 MARPNQEAIETFVSITGLSEAVALQKLEEHGGNLNEAINAHFSEGDRNLMSSSHDGSTAAAQDDFMDIDDQLNAEIHRPPSLLSLARNLNPFSLLDPTVGRSIFDTRLDSTNPAPFVTHPREVREIPIEVKDSDQSAPQAGHLPTIEDVTGTVHAHGPEIHGNVIIDDKDDDDTLPSQTNTSVDHSSRPSAPQSENLPDYSNNDIEEEMIRAAIEASKQEAEENYRNHKIGKQIDLSESGPQPRQSYFEDPELAHAVSLSLKTAEQEKAQHLQGGDFRAPTAGPSKALEAELGEVTSNGRLQAGSSSFKDEAVEAQPLVRNRSRHMSLGSTGSGKDVEFIEASTLPSTTLQDSNNPPRQDEISVHSDEWGGISSEEHDEAVMLEAAMFGGIPEGSRYRHAYAPREFMQNRGFNPRPSHPAYRPPSPSLEAQRLIREQQDDEYLASLLADKEKELKAMEEAEAAREEERQKAEESRKKLQEEQESEKQLAAKEVSLPPEPSSDDDNAVTLLVKMPDGSRRGRRFLKSDNLQSLFDFIDIGRAVKPGSYRLVRPYPRRAFSVEESAATLDELGLTNKQEALFLELI* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04164 584 MobiDBLite consensus disorder prediction 316 338 - -
Rops2g04164 584 CDD UBX 508 582 - -
Rops2g04164 584 Coils Coil 202 222 - -
Rops2g04164 584 Pfam UBA-like domain 6 46 - -
Rops2g04164 584 SUPERFAMILY UBA-like 2 44 IPR009060 GO:0005515
Rops2g04164 584 ProSiteProfiles UBX domain profile. 502 580 IPR001012 GO:0005515
Rops2g04164 584 Coils Coil 443 491 - -
Rops2g04164 584 MobiDBLite consensus disorder prediction 218 233 - -
Rops2g04164 584 MobiDBLite consensus disorder prediction 457 505 - -
Rops2g04164 584 MobiDBLite consensus disorder prediction 345 364 - -
Rops2g04164 584 SMART ubx_3 499 583 IPR001012 GO:0005515
Rops2g04164 584 MobiDBLite consensus disorder prediction 264 283 - -
Rops2g04164 584 Gene3D - 177 274 - -
Rops2g04164 584 MobiDBLite consensus disorder prediction 162 202 - -
Rops2g04164 584 MobiDBLite consensus disorder prediction 176 200 - -
Rops2g04164 584 MobiDBLite consensus disorder prediction 408 428 - -
Rops2g04164 584 SMART uim 205 224 IPR003903 -
Rops2g04164 584 SMART uim 248 267 IPR003903 -
Rops2g04164 584 PANTHER FAS-ASSOCIATED PROTEIN 11 583 - -
Rops2g04164 584 MobiDBLite consensus disorder prediction 345 360 - -
Rops2g04164 584 Gene3D - 1 45 - -
Rops2g04164 584 SUPERFAMILY Ubiquitin-like 465 580 IPR029071 -
Rops2g04164 584 MobiDBLite consensus disorder prediction 218 247 - -
Rops2g04164 584 CDD UBA_Ubx1_like 6 42 - -
Rops2g04164 584 Gene3D - 503 583 - -
Rops2g04164 584 MobiDBLite consensus disorder prediction 457 488 - -
Rops2g04164 584 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 206 224 IPR003903 -
Rops2g04164 584 Pfam UBX domain 503 582 IPR001012 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04164 Rops-Chr2 75838543 75843581 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04164 - - aprc:113849050 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04164 2 75838543 75843581 Rops2g04164 2 75838543 75843581 ECH