Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04134 ATGACATTAGCAACAATGGAAGAGGGTCCAAGGAGCCCAGAAGCGAAGCTGGGGATGAGAGTGGGGGATCTATGGGACGTTCAGGAGCCACAGCTAAGTCCTACTGAGAAGCTCAACGCTTGCTTCGAAAGCATACCTGTTTCTGCGTTTCCTTTGGCTCCTTCAAACCCAGAAATTGAAATCAAATCAGACGCCACCTTGGCCGAAGCCGTTAAAATACTGGCACATCACAACGTTTTCAGCGCACCTGTCGTAGATGTTGATGCACCTGAGGATGCTAGTTGGATTGACAGATACATCGGAATAATTGAGTTTCCTGGAATTGTTGTGTGGATTTTACATCAGTCTGAATCTTCATCTCCTAGGAGTCCATCGACTCCATCCAGTGCAAGTGCTATTGCAGCTGCAGCTAACGGAAGGACTTTTGCTCTAGAACTTGAAGCCTTAGGCCTTGGATCTGCTGCAGCAACTGCAGGAGACTTTTTTGAGGATCTGACTTCTTCTGAACTTTATAAGAATACCAAGGTTCGTGATATTGCAGGGACATTCCGCTGGGCCCCATTTCTTGCTTTGGAGAGATCAAACTCATTTCTAACAATGCTCTTGCTGCTTTCTAAGTACAAGATGAAGAGTGTTCCAGTGGTAGATTTAGGTGCTGGGAGACTTGATATCATTATTACACAATCTGCTGTGATTCATATGTTGGCAGAATGCGCTGGGCTTCAGTGGTTTGAAAGTTGGGGAACCAAGAAACTATCTGAAGTTGGTCTTCCCCTTGTAACAGCAAAGCATATCATCAAGGTTTATGAGGATGAACCAGTCCTTCAAGCATTTAAACTGATGAGGAAAAAGAGGGTTGGAGGGGTGCCTGTAATCCAAAGAGGTAGCAGCAAGGCAGTTGGTAATATAGGCTTGGGAGATGTTCAATTCTTGCTAACTGCCCCAGAAATCTATCATGATTATAGAACTATTACAGTAAAGGACTTCCGGACTGCCGTTAAAAGCTACTTAGAGAAGAATAAAAAGCCATTCCCAATGTCGAGTGAATTCAATACATGCAAAGAGGACTGTACAATCAAAGAATTGATTCTATTGCTTGACCGAGAGAAGATTCTCAGGGCCTATGTTGTGGATGACGATGGTAATCTGCAAGGACTAATCACACTAAGAGATATCATCTCAAGGCTAGTACATGAGCCTCGTGGCTATTTTGGTGATTTCTTTGATGGTGTTCTCCCGCTGCCTGCAAACAGCAGGGTTTAA 1263 0.4418 MTLATMEEGPRSPEAKLGMRVGDLWDVQEPQLSPTEKLNACFESIPVSAFPLAPSNPEIEIKSDATLAEAVKILAHHNVFSAPVVDVDAPEDASWIDRYIGIIEFPGIVVWILHQSESSSPRSPSTPSSASAIAAAANGRTFALELEALGLGSAAATAGDFFEDLTSSELYKNTKVRDIAGTFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVVDLGAGRLDIIITQSAVIHMLAECAGLQWFESWGTKKLSEVGLPLVTAKHIIKVYEDEPVLQAFKLMRKKRVGGVPVIQRGSSKAVGNIGLGDVQFLLTAPEIYHDYRTITVKDFRTAVKSYLEKNKKPFPMSSEFNTCKEDCTIKELILLLDREKILRAYVVDDDGNLQGLITLRDIISRLVHEPRGYFGDFFDGVLPLPANSRV* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04134 420 CDD CBS_pair_SF 263 393 - -
Rops2g04134 420 ProSiteProfiles CBS domain profile. 346 404 IPR000644 -
Rops2g04134 420 SMART cbs_1 57 113 IPR000644 -
Rops2g04134 420 SMART cbs_1 264 313 IPR000644 -
Rops2g04134 420 SMART cbs_1 187 236 IPR000644 -
Rops2g04134 420 SMART cbs_1 349 397 IPR000644 -
Rops2g04134 420 ProSiteProfiles CBS domain profile. 54 118 IPR000644 -
Rops2g04134 420 ProSiteProfiles CBS domain profile. 260 321 IPR000644 -
Rops2g04134 420 Pfam CBS domain 263 308 IPR000644 -
Rops2g04134 420 Pfam CBS domain 346 397 IPR000644 -
Rops2g04134 420 Gene3D - 249 399 IPR046342 -
Rops2g04134 420 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 48 396 - -
Rops2g04134 420 SUPERFAMILY CBS-domain pair 225 406 IPR046342 -
Rops2g04134 420 Gene3D - 37 242 IPR046342 -
Rops2g04134 420 SUPERFAMILY CBS-domain pair 30 236 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04134 Rops-Chr2 75058289 75061101 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04134 - - gmx:100818156 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04134 2 75058289 75061101 Rops2g04134 2 75058289 75061101 ECH