Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04112 ATGACGCTGTTTTTACTCTACGAATCTGCTTCTGGCTATGCTCTCTTAGAGGCTCATGGCCTCGACGAGATTGGACAGAACACCGAAGCGGTTCGGAACTCCGTTTCGGATTTGAACAGGTTCGGGAAGGTCGTTAAGCTTCGTTCTTTTAATCCTTTTACCTCTGCACTTGACGCTCTCAAACAGTGTAACGCTGTCTCTGAAGGCCTATTGACTGATGAGTTGAGAACTGTTTTGGAGACTAACTTGCCCAAAGCTAAGGAAGGTAAGAAGTCCAAATTCAGTTTAGGCGTATCAGATCCTAAGATTGGTTCGCAGATATCTGAAGTGATTAAAATCCCTTGCCAAAGTAATGAGTTTGTGAGTGAACTTCTTCGTGGTGTGCGGCTCCATTTTGATAAGTTTGTCAGTGATCTCAAGTCAGGAGATTTGGAAAAGGCACAACTTGGTCTGGGCCACAGTTACAGCAGAGCAAAGGTGAAATTCAATGTCAATCGAGTTGACAATATGGTCATTCAAGCAATCTTCCTTCTTGATACACTTGATAAGGATGTCAATTCATTCTCCATGAGAGTCAGAGAGTGGTATTCGTGGCATTTTCCTGAACTGGTGAAGATTGTAAACGATAATTATCTGTATGCTAAAGTTGCCAAATTTATTGAGGATAAATCAAAGTTGTCTGAAGAGAATATTCCTGGCTTAACTGACATAGTTGGAGATGAAGATAAAGCGAAGGAGATTGTGGAAGCTGCCAAAGCCTCCATGGGACAGGATTTGTCCCCGGTGGACTTGATCAATGTCCAGCAATTTGCACAGAGGGTAATGGACCTATCTGAGTACAGGAGGAAGCTGTATGATTACCTGGTTGCTAAAATGAATGATATTGCACCAAATTTGGCCTCTTTAATTGGTGAAGTTGTAGGCGCTCGTTTAATTTCCCACGCTGGTAGCCTCACAAATTTAGCTAAGTGCCCCTCTTCCACTCTTCAAATTCTTGGTGCAGAGAAGGCTTTGTTCAGGGCCTTAAAAACAAGGGGAAACACTCCCAAGTATGGCCTGATATTCCACTCTTCTTTTATTGGTCGAGCATCTGCCAGAAATAAGGGCCGCATGGCCCGCTATCTTGCTAACAAATGCTCAATTGCATCACGCATTGACTGCTTTTCTGAAAGGGGTACTACTGCTTTTGGGGAGAAACTCCGTGAACAAGTTGAGGAACGACTTGACTTTTACGACAAGGGAGTTGCCCCTCGTAAGAACATAGATGTCATGAAGTCTGCTATTGAAAGTGCTGAAAACAAAGATACAGAGATGGAAACAGAAGAAGTGCCTGTTGAAGTTTCAAGCAAGAAAGCCAAGAAGAAGAAGCAAAAAGCTGCTGCTGCAGATGAAGGTGATGAGATGGCTGTTGATAAGCCCACAGAAATTACAAATGGTGATGCATCGGTGGATCATAAATCAGAAAAGAAGAAGAAAAAGAAAGAAAAGAGGAAATCGGAACAGGAGATGGAGCTTCTTGATGGTGCCAATGGGGTTGCAAATGAGCAAGATGGAGCAGTTAAAAAGAAGAAAAGTAAAAAGGCTGATAATGGGGAAGTACCGGAGGATACTAACGAGTCTAAGAAGAAGAAAAAGAAATCAAAAAAGGATTCCGAGTAA 1659 0.4262 MTLFLLYESASGYALLEAHGLDEIGQNTEAVRNSVSDLNRFGKVVKLRSFNPFTSALDALKQCNAVSEGLLTDELRTVLETNLPKAKEGKKSKFSLGVSDPKIGSQISEVIKIPCQSNEFVSELLRGVRLHFDKFVSDLKSGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDVNSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKFIEDKSKLSEENIPGLTDIVGDEDKAKEIVEAAKASMGQDLSPVDLINVQQFAQRVMDLSEYRRKLYDYLVAKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFSERGTTAFGEKLREQVEERLDFYDKGVAPRKNIDVMKSAIESAENKDTEMETEEVPVEVSSKKAKKKKQKAAAADEGDEMAVDKPTEITNGDASVDHKSEKKKKKKEKRKSEQEMELLDGANGVANEQDGAVKKKKSKKADNGEVPEDTNESKKKKKKSKKDSE* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04112 552 FunFam Nucleolar protein 56 299 411 - -
Rops2g04112 552 MobiDBLite consensus disorder prediction 431 450 - -
Rops2g04112 552 Pfam snoRNA binding domain, fibrillarin 177 409 IPR002687 -
Rops2g04112 552 Coils Coil 482 509 - -
Rops2g04112 552 MobiDBLite consensus disorder prediction 517 552 - -
Rops2g04112 552 Gene3D Nop domain 299 423 IPR042239 -
Rops2g04112 552 MobiDBLite consensus disorder prediction 457 488 - -
Rops2g04112 552 SMART NOSIC_2 170 222 IPR012976 -
Rops2g04112 552 SUPERFAMILY Nop domain 163 412 IPR036070 -
Rops2g04112 552 Coils Coil 421 441 - -
Rops2g04112 552 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 3 547 IPR045056 GO:0030515|GO:0031428|GO:0032040
Rops2g04112 552 MobiDBLite consensus disorder prediction 431 552 - -
Rops2g04112 552 ProSiteProfiles Nop domain profile. 295 413 IPR002687 -
Rops2g04112 552 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
Rops2g04112 552 Gene3D - 140 298 - -
Rops2g04112 552 FunFam Nucleolar protein 56 140 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04112 Rops-Chr2 74806592 74809669 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04112 K14564 - gmx:100779446 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04112 2 74806592 74809669 Rops2g04112 2 74806592 74809669 ECH