Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04021 ATGGCGAACGCAGGCGACGCCGGAGTTGAAGCCCTACGGCGCCTGAAAACGACGGATCCACCGTCATGGCTGGCACCGAACCCAGCACTGTCAGAAACTGCTCGTGCCGCTTCGCAGTACCTATTTTCTTCCCTCAGACCCTTCACCCCTAAATCACCATTGGACCAACTCCTCGTTGAGGGCTTCGACGCCGAGCAGATATGGCAGCAAATCGACCTCCAATCTCAGCCTCTCTTGTCCTCCCTTCGCCGTCGCTTGAAGCATCTCGCCAAAAACCCCCAAGAGATTTCCCAAATCAAGGTTCCTTCGGAAGTTGGGAAGAACAAAGTGGAGGCAAAGAAAAGAGACGAGTGGGACGAAGAAAGTGATGGTTTTGAGGAGGAATTGGATGAAGTTGACGAAGACGAGGATGAAGAAATGGTAGAAAAGGAGGAGGAGAATCGAAAAGAAGAGGAAGGGGAAGGGGAAGAAGAAGATGATGATGATGAAGAAGAAGAAGGGACCGAGGATGAAGACGAGGAGGAGAAGGGTGAAGGTGGCGGTATTGAGGATAAATTCTTGAAAATAGATGAATTGGCCAAGTACTTAGAGAAAGAGGAAGAGAATTTGGAGAATGGTGAGTTAGAGAGGAAAGGTGAGGAAAGTGATGATGACGACCAGGACACTGAAGATGATGAGGCTGGTGATTTTGGGATGGGTGACGAAGATGAGGAAGCAGAGGGCATGGAGAATACAAGGTATGAAGACTTCTTTGGAGGTAAAAAGGAAAAGGGCTCAAAAAGAAAAGCTCAGTTGCTCCAGGAATCTGAAGATTCTGGCGATGAAGATGACGACATGGAATTTGACGAACAGAAGAAAGGGACTGCTTCTACCCATGAAAAGCAACTGAAAACAATTCAGTCAAAGATAGAGCAGATGGAGAAAGCTAACATAGAGCCAAAAACTTGGACCATGCAGGGTGAGGTATCTGCTGCAAAGAGACCCAAGAATAGTGCACTGGAAGTTGATCTTGACTTTGAACACAATGTGAGACCTGCTCCTGTAATCACTGAGGAGGTTACAGCTTCAATTGAGGATATGATCCAGAAAAGGATTATTGAGGGGCATTTTAATGATGTTCAAAGGGCTCCTAAATTGCCATCTAAAGCGCCTCGGGAAGTTAAAGAGTTGGATGACAATAAAAGCAAAAAGGGTCTTGCAGAAATTTATGAGCAAGAATATGTTCAGCAGAAAGACCCCGCATCTGCTCCATTGTCAGTCAAAGATGAACAAAAGAATGAGGCAAGTATGCTGTTTAAGAGACTCTGTCTGAAGCTGGATGCCCTTTCTCATTTTAACTTTGCTCCAAAACCTGTTATAGAGGACATGTCGTTTCAAGCTAATGTACCTGCTCTGGCAATGGAAGAAATTGCACCTGTGGCTGTTTCAGATGCTGCTATGCTGGCTCCTGAGGAGGTCTTTGATGGTAAGGGTGATATTAAGGAAGAAGCGGAGCTTACAAAGGAAGAAAGGAAAAGGAGGAGAGCTAATAAGAAAAGAAGATTTAAAGCTGAGACAGTAAAAAGGACAGAAAAGAAGGTGGGAGAGGGTGCATTAGCTACCCAAGTTAATGGCTAA 1617 0.4558 MANAGDAGVEALRRLKTTDPPSWLAPNPALSETARAASQYLFSSLRPFTPKSPLDQLLVEGFDAEQIWQQIDLQSQPLLSSLRRRLKHLAKNPQEISQIKVPSEVGKNKVEAKKRDEWDEESDGFEEELDEVDEDEDEEMVEKEEENRKEEEGEGEEEDDDDEEEEGTEDEDEEEKGEGGGIEDKFLKIDELAKYLEKEEENLENGELERKGEESDDDDQDTEDDEAGDFGMGDEDEEAEGMENTRYEDFFGGKKEKGSKRKAQLLQESEDSGDEDDDMEFDEQKKGTASTHEKQLKTIQSKIEQMEKANIEPKTWTMQGEVSAAKRPKNSALEVDLDFEHNVRPAPVITEEVTASIEDMIQKRIIEGHFNDVQRAPKLPSKAPREVKELDDNKSKKGLAEIYEQEYVQQKDPASAPLSVKDEQKNEASMLFKRLCLKLDALSHFNFAPKPVIEDMSFQANVPALAMEEIAPVAVSDAAMLAPEEVFDGKGDIKEEAELTKEERKRRRANKKRRFKAETVKRTEKKVGEGALATQVNG* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04021 538 Coils Coil 189 216 - -
Rops2g04021 538 Coils Coil 115 161 - -
Rops2g04021 538 MobiDBLite consensus disorder prediction 282 296 - -
Rops2g04021 538 MobiDBLite consensus disorder prediction 244 269 - -
Rops2g04021 538 Coils Coil 494 514 - -
Rops2g04021 538 MobiDBLite consensus disorder prediction 211 243 - -
Rops2g04021 538 MobiDBLite consensus disorder prediction 498 521 - -
Rops2g04021 538 MobiDBLite consensus disorder prediction 106 120 - -
Rops2g04021 538 PIRSF snoRNP_Mpp10 10 286 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Rops2g04021 538 PIRSF snoRNP_Mpp10 234 536 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Rops2g04021 538 Pfam Mpp10 protein 268 521 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Rops2g04021 538 Pfam Mpp10 protein 50 279 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Rops2g04021 538 Coils Coil 289 309 - -
Rops2g04021 538 MobiDBLite consensus disorder prediction 91 296 - -
Rops2g04021 538 MobiDBLite consensus disorder prediction 121 178 - -
Rops2g04021 538 MobiDBLite consensus disorder prediction 1 25 - -
Rops2g04021 538 MobiDBLite consensus disorder prediction 179 210 - -
Rops2g04021 538 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 4 526 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04021 K14559 - gmx:100781093 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04021 2 73524014 73529009 Rops2g04021 2 73524014 73529009 ECH