Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03993 ATGGCTAACACTAATTTAATAAGAACCATCGTTGGAGTAATGGGAAATGTCATATCTTTTGGGTTATTCATGTCTCCTCTACCTACATTTATAACAATATGGAAGGCGAAATCAGTGCAAGATTTCAAGCCAGATCCCTATCTAGTAACCATACTCAATTGTGCATTTTGGTCAGTCTATGGAATGCCCTTTGTAACTGAAAGTAACGTTCCTGTAATAACAATCAATACCTTTGGCTTCGTCCTTGAGATCGTGTACACTTTGATCTTCCTGATATACTCAACGGGAAGTAAGCGTAGGAAGGTGTCGCTGATCCTTACAGGTGAACTCATCTTCATTGTGATAACGGTATTTTTAATCTTGTACTTTGCTCCCTCCCCAAACCAAAGAAAGACCATTGTTGGGATTATATGCTTAGTCTTCAACATCCTCATGTACTTTGCACCCTTGACTGTCATGCGTCGAGTAATTCGAACGAAGAGCGTGAAGTACATGCCTTTGTTACTTTCTCTCGCTGGCTTTGCCAATGGAATTATCTGGGTGATTTACTCACTCCTTAAATGGGATCCATTCATAGTGTTTCCGAATGGCTTGGGAGCACTTGCTGGGTTGGCACAACTCGTGCTCTATGCCGCTTATTACCGAACAACCAACTGGGACGAAGACACCCCATCTGACGTCTAA 684 0.4196 MANTNLIRTIVGVMGNVISFGLFMSPLPTFITIWKAKSVQDFKPDPYLVTILNCAFWSVYGMPFVTESNVPVITINTFGFVLEIVYTLIFLIYSTGSKRRKVSLILTGELIFIVITVFLILYFAPSPNQRKTIVGIICLVFNILMYFAPLTVMRRVIRTKSVKYMPLLLSLAGFANGIIWVIYSLLKWDPFIVFPNGLGALAGLAQLVLYAAYYRTTNWDEDTPSDV* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03993 227 Gene3D - 6 98 - -
Rops2g03993 227 Gene3D - 127 218 - -
Rops2g03993 227 PANTHER RAG1-ACTIVATING PROTEIN 1 17 217 IPR047664 -
Rops2g03993 227 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016020
Rops2g03993 227 Pfam Sugar efflux transporter for intercellular exchange 10 95 IPR004316 GO:0016020
Rops2g03993 227 FunFam Bidirectional sugar transporter SWEET 130 223 - -
Rops2g03993 227 FunFam Bidirectional sugar transporter SWEET 9 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03993 Rops-Chr2 73001340 73004784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03993 1 193 Miscellaneous Gene Families AT5G62850 53.368 3.20e-77 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03993 K15382 - gmx:100810948 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03993 2 73001340 73004784 Rops2g03993 2 73001340 73004784 ECH