Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03986 ATGAGATCCTCTACTTCCCGTACCTTCTTCACTGTCTTTGCTGTCTTCCTCATCGCGATCCTGCCGCATGTTCAGGGACATTCACTGTCGCCGTTTGCAACGGCTCTCGAAACCCTACAGAAACAACTAGGGTACACCTTCAAGAACATTGGTCTTCTTCGTCGTGCCATGACCCATGCTTCCTTCTCGGAAGAGAACAACAAAGCCTTCAGCATTTTGGGTGCCAGTGTCATTGAAACAACCGTGTCTTTCCACTTGCTTTCCAAAGACGCTGATTTTTCTGCTACAGAGCTGAACCGTCGATTGTCCAAAGTCTCCAACGTGGAATCTTCCTGTGCCGTTGATGGAATGCACTTGGGCTTGCACAAGGTGGTTCGAGTTTCACACAAGACCAATTCTTCTGCCCCTGCTGTGCTGTGCGGTGCGTTCCGTGCAATCTTTGGTGCTATTGCTATTGATGCTCGCAATTCGGATGATGCAGGGGGCTACATCGAAAGAAGAGGGAAAATGGGGACGTGA 519 0.4971 MRSSTSRTFFTVFAVFLIAILPHVQGHSLSPFATALETLQKQLGYTFKNIGLLRRAMTHASFSEENNKAFSILGASVIETTVSFHLLSKDADFSATELNRRLSKVSNVESSCAVDGMHLGLHKVVRVSHKTNSSAPAVLCGAFRAIFGAIAIDARNSDDAGGYIERRGKMGT* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03986 172 CDD RIBOc 52 153 IPR000999 GO:0004525|GO:0006396
Rops2g03986 172 ProSiteProfiles Ribonuclease III family domain profile. 36 155 IPR000999 GO:0004525|GO:0006396
Rops2g03986 172 SMART riboneu5 51 169 IPR000999 GO:0004525|GO:0006396
Rops2g03986 172 FunFam Protein NUCLEAR FUSION DEFECTIVE 2 34 168 - -
Rops2g03986 172 SUPERFAMILY RNase III domain-like 30 155 IPR036389 GO:0004525|GO:0006396
Rops2g03986 172 Gene3D Ribonuclease III domain 34 165 IPR036389 GO:0004525|GO:0006396
Rops2g03986 172 PANTHER RIBONUCLEASE III 28 154 IPR011907 GO:0003723|GO:0004525|GO:0006364
Rops2g03986 172 Pfam Ribonuclease-III-like 51 154 IPR000999 GO:0004525|GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03986 - - aprc:113847954 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03986 2 72884669 72885969 Rops2g03986 2 72884669 72885969 ECH