Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03985 ATGGGAAGTGAAGCTCCGACATGGGACACACCCACCGTTCGCGTCTTCAACATTCCTCAATGTGTCACAGCCAAAGACCTCCTCGACTTCCTCGATTCGGTTGTGGGACCCTCCTCCGTCTTCGCCCTCGAAATCTTCACCGACCACAACAACTGGAAGTCCCGCGGTGCTGGTCGTGTCCAGTTCGAGACCTTCGAAGCCAAGTCACGTGCTCTCTCTCTCTCCCTCTCCGACAGACTCCTCTTCAACTCCCACTTCCTCCGCCTCTCCGATTCCTTCGACGACATCATCCACAGGCCTCCCCTCCCCCGACAACGCCTCGATAACGGCATCCTCTACGCCGGTTTCATGGCCTCCCACGACCGCATGAGTGTTCTAGAGACATGGGAGGGTGTCCGGGGTTGGGTCATGCCACAAAGGAGGAGACTTGATTTCTGGGTATGGCTTGGTGGTGAGTGTTTCAGGCTTGAGATTCTGTTTGAAGATATTTTAGAGGCTGATGGGTATTGTTTGGGAGGTGTTAAACTCAATGCCCTCCTCTTGAAGCTGAAATATGGACCTAAGATCTATCAGAAAAAAGCAGGGCCGGATGTTGCTGCGAAGTTTAAGACCGATAGGTACCATTTCTGTAAGGAGGATTTTGAGATTCTTTGGGTGCGGACAACAGACTTCTCACCTATAAAGTCAATTGGGCATTCTACATCATTTTGTTGGGAAATTGAGGAAGAAGCATTTGCTTCTGAGATTTTTCAATGTTTCCCACTCTACAGAGAAAATTTGAAAGATTTAACGCTGGAAGATGGGGAAGAATACTGTTCTCTGACGGATACAGTCCCACTTGTTAAGTGTGGTTCAGATTCTAAGTTGCCTTTTGAGACTCTTTTCCAGTTGAATTCTCTTGTTCATACCCACAAAATTAGTCTTGCTTCGGTGGATGATGAATTGATGGACTTGTTAGGAAGCTTAAGTGAAGAAACTAAAGCGATGATTTTTCAGAAACTTCACAAGCTGAATTCCACTTGTTATGAGCCTCTGAAATTTGTGAAGACTCAATTACATGTGCAAAGTAGCAAGAGTAGAAGTCTTCGGCCATCGCCGCAGAAAAGGTTGATGGATAGTAACATAATGAGTTGTCATAGAGCTTTGATTACCCCATCAAAGATTTATTGCCTTGGTCCTGAGCTTGAAACCTCAAATCATGTGGTGAAGCATTTTGCATCATATGCTTCGGACTTCATGAGGATTACTTTTGTTGAAGAAAATTGGAATAAGCTTCCAACTAATGCAGTATCAACTAGTGTGCTAAAGGGAATCTTTGCAAAGCCTTTTAAAACTGAAATATATAAGCGGATATTGACTATTCTCCGAGATGGGATTGTAATTGGATCGAAAAGATTTGAGTTTCTAGCCTTCTCTGCTAGTCAACTGCGATCAAGTTCCGTTTGGTTATTTGCTTCTAATGACAATGTGAAAGCAGCAGATATCAGAGAATGGATGGGATGCTTCAACAACATTCGCAGTATTTCTAAATGTGCAGCAAGGATGGGTCAGCTGTTCAGTTCTTCCATGCAAACTTTTGAAGTTCCCCCTCAAGAAGTGCAGATAATTCCAGATATTGAAGCTACCTTTGATGGTATAAAGTACTGTTTCTCAGATGGTATTGGAAAAATTTCCCAATCTTTTGCAAGGCAAGTTGCTCAAAAGCTAAAACTGGATCAGAGTCATATTCCATCGGCATTTCAAATTCGGTATGGGGGATATAAAGGTGTCATTGCTGTTGATCGCCATTCCTATAGGAAGTTATCATTGCGTAGCAGTATGCGTAAATTTGAATCCAAAAACAGGATGCTTTGTGTCACTAAATGGAGTGAGTCAATGCCTTGCTTTCTCAATCGAGAGATTATATCCCTGCTGTCTACCTTAGGTGTAAAAGATGAGGTGTTTTTGGCATTGCAACAGGAACAATTGCATTTGCTAGGAAGGATGTTGACTGATAGTGAGGCGGCTTTGGATGTTTTGGAAAGTTTAAGTGGAGCTAGTTCAAAAAGCATTCTAATGAAGATGTTGCATGGATTTTATGAGCCAAGCAGTGAGCCTTACCTATCGATGATGCTTAAGGCTCTTTATACAGACCAATTATCTGATTTGAAAAGTAGATGCCGGATATTTGTCCCCAAGGGTCGAGTCTTAGTCGGTTGCTTGGATGAAACTGGTCTTTTGAATTATGGCCAAGTATTTGTCCGCATAACTGTGAAAAAAACTAAGGAAAAATTTGAAGATGAAAGCTTAAGGAAAGTGGATGGCGATCAGGGCACACGTATAATAGTGGGGAAGGTGGTGGTCACAAAAAATCCTTGTCTTCACCCAGGAGATGTCAGAGTCCTTGATGCTATCTACAATGAAGAATTAGAGGAAAAGGGTTTGAAGGATTGCCTTGTATTTCCACAAAAAGGACCTAGGCCTCATCCAAATGAATGCTCTGGTGGTGATCTTGATGGAGATTTATTCTTCATAAGCTGGGACAAAGATCTGATCCCATGTGAAACTGAGGATCCAATGGATTACACAGGAAGGAGGCCTCGTATAATGGACCATAAGGTGACACTAGAGGAAATCCAACAATTTTTTGTTGATTACATGATCAATGATACTTTGGGTGCTATCTCCACCGCACATCTAGTTCACGCAGACCGTGAACCAGATAAGGCCAGGAGTAGAAAATGTCTGGAGTTGGCAGAGCTTCATTCCATGGCTGTTGACTTTGCAAAGACTGGAGCACCTGCTGAAATGCCTAGAGCTTTGAAACCAAGAGAGTTTCCGGATTTCATGGAGAGGCAGGGCAAGCCTATGTATATCTCCAAAGGGGTACTAGGAAAACTTTATCGTACCATAGTTGAGTCTAGATTGCAAATGAGGTCTGACCTTGTCTGGTCAGAGAAGCTAGCTGAAGAAGCATATGATCATAGTCTTGAAGTGAATGGTTTTGAGGCCTTCCTTGAGACTGCATCAAGTCACAAAGAAATGTATGCCCAGAAGATGAACACTTTAATGAAATTCTATGGTGCAGAGACTGAGGATGAAATGCTAACTGGTAACTTGCAAAACCGTGCTTCATATTTGCAACGTGATAACAGGAAATATGGAGATATGAAGGATCGGATTTTGATCGCAGTGAAGGATCTTCAGCGGGAAGCTAAAGAATGGTTTGAAACTGATTGTCAACCGCATGAGTATCAACCTTTGGCATCTGCATGGTATCATGTGATCTATCACCCCAGTTATCACCAGGAAAGCTCCAATTTTTTAAGCTTTCCATGGATAGTTGGTGACATTTTATTGCATATCAAGTCTGTAAACAGTAAAGTTCACAGTTGA 3375 0.4273 MGSEAPTWDTPTVRVFNIPQCVTAKDLLDFLDSVVGPSSVFALEIFTDHNNWKSRGAGRVQFETFEAKSRALSLSLSDRLLFNSHFLRLSDSFDDIIHRPPLPRQRLDNGILYAGFMASHDRMSVLETWEGVRGWVMPQRRRLDFWVWLGGECFRLEILFEDILEADGYCLGGVKLNALLLKLKYGPKIYQKKAGPDVAAKFKTDRYHFCKEDFEILWVRTTDFSPIKSIGHSTSFCWEIEEEAFASEIFQCFPLYRENLKDLTLEDGEEYCSLTDTVPLVKCGSDSKLPFETLFQLNSLVHTHKISLASVDDELMDLLGSLSEETKAMIFQKLHKLNSTCYEPLKFVKTQLHVQSSKSRSLRPSPQKRLMDSNIMSCHRALITPSKIYCLGPELETSNHVVKHFASYASDFMRITFVEENWNKLPTNAVSTSVLKGIFAKPFKTEIYKRILTILRDGIVIGSKRFEFLAFSASQLRSSSVWLFASNDNVKAADIREWMGCFNNIRSISKCAARMGQLFSSSMQTFEVPPQEVQIIPDIEATFDGIKYCFSDGIGKISQSFARQVAQKLKLDQSHIPSAFQIRYGGYKGVIAVDRHSYRKLSLRSSMRKFESKNRMLCVTKWSESMPCFLNREIISLLSTLGVKDEVFLALQQEQLHLLGRMLTDSEAALDVLESLSGASSKSILMKMLHGFYEPSSEPYLSMMLKALYTDQLSDLKSRCRIFVPKGRVLVGCLDETGLLNYGQVFVRITVKKTKEKFEDESLRKVDGDQGTRIIVGKVVVTKNPCLHPGDVRVLDAIYNEELEEKGLKDCLVFPQKGPRPHPNECSGGDLDGDLFFISWDKDLIPCETEDPMDYTGRRPRIMDHKVTLEEIQQFFVDYMINDTLGAISTAHLVHADREPDKARSRKCLELAELHSMAVDFAKTGAPAEMPRALKPREFPDFMERQGKPMYISKGVLGKLYRTIVESRLQMRSDLVWSEKLAEEAYDHSLEVNGFEAFLETASSHKEMYAQKMNTLMKFYGAETEDEMLTGNLQNRASYLQRDNRKYGDMKDRILIAVKDLQREAKEWFETDCQPHEYQPLASAWYHVIYHPSYHQESSNFLSFPWIVGDILLHIKSVNSKVHS* 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03985 1124 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 11 94 IPR000504 GO:0003723
Rops2g03985 1124 SUPERFAMILY RNA-binding domain, RBD 5 93 IPR035979 GO:0003676
Rops2g03985 1124 PANTHER RNA-DEPENDENT RNA POLYMERASE 11 1116 IPR007855 GO:0003968
Rops2g03985 1124 Pfam RNA dependent RNA polymerase 383 964 IPR007855 GO:0003968
Rops2g03985 1124 Gene3D - 3 79 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03985 Rops-Chr2 72848985 72854530 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03985 K11699 - gmx:100808274 1823.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03985 2 72848985 72854530 Rops2g03985 2 72848985 72854530 ECH