Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03979 ATGCCCCAAGAAATGGGAGACAACAACAAACGTAAGAGAGGACGCAAGCCCAAACCTAAAAACCCCGTCCCCGAAACCCTAGACTTCCCTGCCACCACTGCCCCTAACGCAACAACCACCACCACCACCATGGACGACGTTTTCTCTGTCGGAAATGTTGAACTTATCGATAACACTGCCTCTCCCCACCACCGTGGCCGCCGCGGCCGCCCCAAGAAGGTCCCTGACAAGCCCCTCTCTCTCCCCACTGGGCGCCGCCACGCCCGCCCTGTCGATGGCAGCAGCGACTTCACGGTTCCCGTCGAAGTTGGGGGCGCCACCACAATGGAAGTGGACCCTGTGTGGGAGGCGAGGGTGTTGCCGGCGATGGACTCGGTGGTGAAGGTGTTCTGCGTGCACACGGAGCCGAATTTTTCGCTGCCGTGGCAGAGGAAGAGGCAATACAGCTCCAGCAGCAGTGGGTTTGTGATTAGTGGCAAAAGGGTTCTCACCAATGCGCATTCGGTTGAGCACTATACACAGGTCAAGCTCAAGAAACGTGGCTCTGATACCAAGTACTTGGCCACTGTTCTTGCCATTGGAACCGAATGTGACATAGCCATGCTTACAGTTGATGATGATGAGTTCTGGCAAGGGATGTCACCTGTAGAGTTTGGGGATTTGCCCACACTTCAAGATGCAGTCACTGTTGTGGGCTACCCAATTGGCGGAGACACTATCTCTGTGACCAGTGGTGTCGTATCACGCATTGAGATTCTATCTTATGTCCATGGTTCCACCGAACTTCTAGGTTTACAGATAGATGCTGCTATAAATTCTGGCAATTCTGGTGGGCCTGCATTTAATGATAAAGGAAACTGTGTGGGGATTGCATTTCAGTCCCTCAAACACGAAGATGTGGAGAACATAGGTTATGTCATTCCGACACCAGTTATCATGCATTTTATCCAGGATTATGAGAAGAATGGAGGATATACTGGGTTCCCTATTCTTGGGGTTGAGTGGCAGAAAATGGAAAATCCTGATCTAAGAATGGCAATGGGTATGAAACCTGATCAGAAAGGTGTGCGTATTAGAAGAATTGATCCTACTGCTCCTGAATCTAAGGTTTTGAAACCATCAGATGTTATCCTTAGCTTTGATGGGGTCGACATTGCCAATGATGGAACTGTTCCATTTCGTCATGGAGAGCGCATTGGTTTCAGTTATCTCATTTCCCAGAAATATACTGGCAATAATGCAGCAATCAAAGTATTGCGGAATTCAGATGTTTTCAAATTTGACATTAAACTTGATAGTCACAGAAGGCTTATTCCAGCTCACAGCAAGGGCAGACCTCCCTCATATTATATTATTGCAGGATTTGTTTTTACCACTGTTTCGGTTCCTTATCTTCGTTCTGAGTATGGGAAGGATTATGAGTATGAAGCTCCAGTCAAGCTTTTGGATAAAATGCTGCATTCAATGCCACAATCACCAGATGAACAACTTGTTGTGGTCTCTCAGGTGCTGGTGGCTGATATCAACATTGGATATGAAGATATTGTTAACACTCAGGTCCTTGCTTTCAATGGTAAACCTGTCAAAAATCTTAAGAGCTTGGCCACTATGGTGGAGAGCTGCGATGATGAATATCTAAAATTTGATCTAGACTATGATCAGATAGTGGTCCTTCGCACGAAGGCTGCAAAAGCAGCTACTCTGGATATTCTTGCAACACACTGCATTCCATCAGCAATGTCTGATGATCTTAAGTCATGA 1761 0.4708 MPQEMGDNNKRKRGRKPKPKNPVPETLDFPATTAPNATTTTTTMDDVFSVGNVELIDNTASPHHRGRRGRPKKVPDKPLSLPTGRRHARPVDGSSDFTVPVEVGGATTMEVDPVWEARVLPAMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVISGKRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVDDDEFWQGMSPVEFGDLPTLQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGNCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGGYTGFPILGVEWQKMENPDLRMAMGMKPDQKGVRIRRIDPTAPESKVLKPSDVILSFDGVDIANDGTVPFRHGERIGFSYLISQKYTGNNAAIKVLRNSDVFKFDIKLDSHRRLIPAHSKGRPPSYYIIAGFVFTTVSVPYLRSEYGKDYEYEAPVKLLDKMLHSMPQSPDEQLVVVSQVLVADINIGYEDIVNTQVLAFNGKPVKNLKSLATMVESCDDEYLKFDLDYDQIVVLRTKAAKAATLDILATHCIPSAMSDDLKS* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03979 586 Pfam Trypsin-like peptidase domain 153 290 - -
Rops2g03979 586 Gene3D - 105 209 IPR043504 -
Rops2g03979 586 Gene3D - 210 321 IPR043504 -
Rops2g03979 586 PANTHER - 119 584 - -
Rops2g03979 586 MobiDBLite consensus disorder prediction 1 44 - -
Rops2g03979 586 SUPERFAMILY PDZ domain-like 354 436 IPR036034 GO:0005515
Rops2g03979 586 MobiDBLite consensus disorder prediction 57 99 - -
Rops2g03979 586 CDD PDZ_serine_protease 329 421 - -
Rops2g03979 586 FunFam protease Do-like 9 211 321 - -
Rops2g03979 586 PRINTS HtrA/DegQ protease family signature 182 202 IPR001940 GO:0004252|GO:0006508
Rops2g03979 586 PRINTS HtrA/DegQ protease family signature 370 382 IPR001940 GO:0004252|GO:0006508
Rops2g03979 586 PRINTS HtrA/DegQ protease family signature 261 278 IPR001940 GO:0004252|GO:0006508
Rops2g03979 586 PRINTS HtrA/DegQ protease family signature 154 166 IPR001940 GO:0004252|GO:0006508
Rops2g03979 586 PRINTS HtrA/DegQ protease family signature 224 248 IPR001940 GO:0004252|GO:0006508
Rops2g03979 586 Pfam PDZ domain 438 583 IPR041517 -
Rops2g03979 586 Gene3D - 437 586 IPR046449 -
Rops2g03979 586 SUPERFAMILY Trypsin-like serine proteases 119 323 IPR009003 -
Rops2g03979 586 Gene3D - 324 436 IPR036034 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03979 Rops-Chr2 72806732 72815131 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03979 K25897 - gmx:100817187 1014.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03979 2 72806732 72815131 Rops2g03979 2 72806732 72815131 ECH