Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03943 ATGATGCCCCTCAAGATGAGTGAGATGTGGACGACAATGGGGTCAACCTTAGCCAGCTTCATGTTTGTTTGGGCGATCATAAGACAGTATTGTCCGTACGAGGTACGACGTTTCTTCGAGAAGTATACACATAGGATCACTGGCTACTTCTACCCTTACATTCGCATCTCCTTTCATGAGTTCTTGGGAGATAGACTCAAGAGAAGTGAGGCTTATGCAGCTGTGGAGGCATACCTTAGTGCCAATACATCAAAGAGTGCTAAAAGGCTCAAAGCTGAGATGGGTAAGGATAGTAGCAACTTGGTGTTGACTATGGATGAGTATGAGAGAGTAACTGATGATTATGAAGGTGTGAATATTTGGTGGGTTTGTAGCAAAGTTATGTCACCAGCAAGGTCCATGCCTTATTATCAAGAACAAGAGAAGAGGTTCTACAAGCTCACTTTTCATAAGAAATATAGGGACATAATCACTGGGTCATATTTGGAGCATGTGATGAGGGAGGGGAAGGAGATTCGTTTGAGGAACAGGCAGAGGAAGTTGTATACCAATAGCCCTGGTTATAAGTGGCCTAGTTATAAGCAAACTATGTGGAGTCACATTGTGTTTGAGCACCCTGCAACATTTGAAACGATGGCCATGGAGCCTGAGAAGAAGCAAGAGATCATTGAGGATTTGGTTACTTTCAGCAAAAGTAAGGATTTTTATGCTAGGATTGGGAAGGCCTGGAAAAGGGGTTATTTACTTTATGGCCCTCCTGGTACTGGTAAGTCTACTATGATTGCTGCAATGGCTAATTTATTGGCCTATGATGTCTATGACTTGGAGCTCACTGCAGTGAAGGACAACACAGAGCTGAGGAAGCTTTTGATTGAGACAACTAGTAAGTCTATAATTGTTATTGAGGACATTGATTGCTCACTTGATCTTACAGGGCAGAGGAAGAAGAAGGGAGATAAGTCGTCAGATGATGAGAATGATAAGGTGAACTCTGATGTTGGAAGGAAAGAAGGCAAGGAAGAAGGAAGCAGTGGTAGCAAAGTGACACTTTCAGGGTTGTTGAATTTCATAGATGGGATATGGTCTGCTAGTGGAGGTGAGAGGTTGATTGTGTTCACTACTAATTATGTGGAGAAGCTTGATCCAGCACTTATTAGAAGGGGTAGAATGGACAAGCATATAGAACTCTCTTACTGCACTTTTGATGGGTTTAAAGTGCTTGCCAATAATTACTTGAAGCTTCAGACTCATCCATTGTTTGACACAATTCAGAGGCTAATTGGGAAGGTCAAGATCACCCCAGCTGATGTTGCTGAGAACCTTATGCCCAAGTCTACACAGGATGATGCGGATAAGTGTCTTTCAAACTTGATTGAAGCACTTGAGGAATTAGCAGCTGCTACAAAAGCTGAGGAGCTGAGACAGAGTAGTCCCATTAAGGAAAATGAGGAGCTGGAACGCATTGGTCCCATTAAGGAAAATGGAGAGTTTCATGATGACAAGAAACTGATCAAGCTATGA 1521 0.426 MMPLKMSEMWTTMGSTLASFMFVWAIIRQYCPYEVRRFFEKYTHRITGYFYPYIRISFHEFLGDRLKRSEAYAAVEAYLSANTSKSAKRLKAEMGKDSSNLVLTMDEYERVTDDYEGVNIWWVCSKVMSPARSMPYYQEQEKRFYKLTFHKKYRDIITGSYLEHVMREGKEIRLRNRQRKLYTNSPGYKWPSYKQTMWSHIVFEHPATFETMAMEPEKKQEIIEDLVTFSKSKDFYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLAYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLDLTGQRKKKGDKSSDDENDKVNSDVGRKEGKEEGSSGSKVTLSGLLNFIDGIWSASGGERLIVFTTNYVEKLDPALIRRGRMDKHIELSYCTFDGFKVLANNYLKLQTHPLFDTIQRLIGKVKITPADVAENLMPKSTQDDADKCLSNLIEALEELAAATKAEELRQSSPIKENEELERIGPIKENGEFHDDKKLIKL* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03943 506 ProSitePatterns AAA-protein family signature. 368 387 IPR003960 GO:0005524|GO:0016887
Rops2g03943 506 Gene3D - 199 394 IPR027417 -
Rops2g03943 506 Gene3D - 395 455 - -
Rops2g03943 506 MobiDBLite consensus disorder prediction 312 346 - -
Rops2g03943 506 PANTHER BCS1 AAA-TYPE ATPASE 12 469 - -
Rops2g03943 506 FunFam AAA-ATPase ASD, mitochondrial 199 394 - -
Rops2g03943 506 Pfam Domain associated at C-terminal with AAA 32 124 IPR025753 -
Rops2g03943 506 MobiDBLite consensus disorder prediction 312 343 - -
Rops2g03943 506 CDD RecA-like_BCS1 222 396 - -
Rops2g03943 506 Pfam ATPase family associated with various cellular activities (AAA) 248 397 IPR003959 GO:0005524|GO:0016887
Rops2g03943 506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 446 IPR027417 -
Rops2g03943 506 SMART AAA_5 243 400 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03943 Rops-Chr2 72216861 72218595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03943 208 424 Miscellaneous Gene Families AT5G58870 28.444 1.52e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03943 - - gmx:100798176 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03943 2 72216861 72218595 Rops2g03943 2 72216861 72218595 ECH