Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03920 ATGACGACGCCATTTCAGCAGGCACCGCAAACAGTGAGGAGACTGGTGGTGGAAGTTGTGGACGCTCGCAACCTGCTCCCCAAAGATGGTCAAGGAAGCTCAAGCCCTTACGTCATCGCTGACTTCGATGGGCAGAGGAAACGAACCACCACCCGGTTCAAGGAGCTCAATCCGGTCTGGAATGAGACCCTCGAGTTCATCGTCTCCGACCCTGACAACATGGAGTACGAGGAGCTCGAGGTTGAGGTTTACAACGACAAGAAGTTTGGTAACGGAAGCGGCCGCAAGAACCACTTCCTTGGCAGGGTTAAGCTCTACGGATCACAGTTCTCCGCAGGAGGGGAAGAAGCTCTGGTTTATTACACACTTGAGAAGAAGAGCGTTTTCAGTTGGATAAGGGGTGAAATCGGGCTCAAGATTTATTACTATGACGAGTTGCTGCAAGAGGATGACAGACAGCAGCTCCCGCTGCCGGAGGAGCAGCAAGCCGTCGGAACAGAGCAAGAGAAGAACAGGCCGCCGCCGGGGATGACGATGGCGGAGGAAGGAAGGGTTTTCGAGGTTCCTGGACCAATAGAGCATTGCGTGCCAGAAGGTCCTCCTCATTCGCCGCGTGTTATGGTTGTTGAAGAATCGCCGCCGCCGGTGGTTCATGTTCCACAGGATCCTCCGTTGCCGGAAATGTGTGGTCCTCCGGAATCGGAAATGCAGTACCATCCGGAGGTGAGGAAAATGCAGGCGGTTAGAGCGGAGAGAGTGAGGATTTTGAAGAAGCCTAACGGTGATTACTTGCCCAAAGATATCTCCGGCAAGAAAACCGGCGTTGAGTCAGAAAGGGTTCATCCTTACGATCTGGTCGAGCCGATGCAGTATCTGTTCGTGAGAATCGTGAAAGCCCGTGGGCTTGCTCCTCCCTGTAAAAGTCCATTCGTGAAGGTTCGAACGTCTAGTCACTACGTGAGATCAAAGCCCGCGATTTATCGTCCAAACGAGCCCACTGACTCGCCGGAGTGGAACCAGGTGTTTGCATTGGGTTACAACAAAACCGACGCAGCCAGTGCCACGTTGGAGATTTCCCTATGGGACTCCCCGACGGAGAGTTTTCTCGGCGGCGTTTGCTTCGATCTTTCCGACGTCCCCGTGCGAGACCCTCCAGACAGCCCTCTGGCACCGCAATGGTACCGCCTAGAAGGAGGCGCCGCGGATCAAAATCCCGGCAGGGTTTCCGGCGACATCCAACTCTCCGTTTGGATCGGTACGCAATCCGACGACGCATTCCCAGAAGCATGGAGTTCAGATGCACCGTACGCGGCGCACTCTCGATCGAAGGTTTACCAGTCACCAAAGCTTTGGTACCTTCGCGTAACGGTAATCGAAGCGCAAGACCTTAACATGGCTCCAAATCTACCTCCATTGACGGCACCGGAAATACGGGTGAAGGTGCAGTTAGGGTTCCAATCACAACGGACAAGGCGAGGGTGCATGAACCATCATAGCATGTCGTTTCACTGGAACGAAGACATTCTCTTCGTAGCAGGGGAGCCTCTAGAAGATTCCATGATCCTTCTAGTGGAAGATCGCACGGCCAAGGAAGCGGTGCTCCTTGGCCACGTCGTGATTCCACTTAGCTCCATCGAGCAACGAATCGACGAGCGCTACGTGCCAGCGAAATGGTTCCCTCTTGAGGGAGGGTCCTACTGCGGTCGAGTCTACCTGCGCCTCTGTCTTGAGGGAGGGTATCACGTGCTGGACGAAGCGGCGCACGTGTGCAGCGACTTCCGCCCCACGGCGAAACAGCTGTGGAAACCGGCCGTCGGAATTCTAGAACTGGGAATCTTAGGCGCTCGTGGCCTCCTCCCCATGAAATACAAAGGCCCCGGAAAGGGCTCCACCGATGCTTACTGTGTGGCCAAGTATGGCAAGAAGTGGGTCCGAACCCGCACCGTAACTGACAGCTTTGATCCACGCTGGAACGAGCAGTACACGTGGCAGGTCTACGACCCCTGCACCGTCTTGACCGTTGGCGTGTTTGACAACTGGCGCATGTTTGCTGACGTGTCAGAATGCAAGCCCGATTGCAGCATCGGCAAGGTGCGCATACGTGTATCCACGCTGGAGAGCAACAAGGTGTACACCAGCTCTTATCCCCTGCTGGTGTTGACGCGAACCGGGTTGAAGAAAATGGGGGAAATCGAGATGGCGGTTCGGTTCGCCTGCCCTTCGTTGTTGCCCGACACGTGTGCGGTTTACGGGCAGCCCCTGCTTCCCAGAATGCACTATCTCCGCCCGCTTGGGGTGGCCCAGCAGGAGGCTCTGCGTGGGGCTGCCACCAAGATGGTGGCGCAGTGGCTGGCACGGTCGGAGCCACCGTTGGGGCACGAGGTTGTTCGTTACATGTTGGATGCTGACTCGCACTCTTGGAGCATGAGGAAGAGCAAGGCCAATTGGTTCAGAATCGTTGCTGTCTTGGCTTGGGCTGTTGGGTTGGCAAAGTGGTTAGATGAAATCAGAAGGTGGAAGAACCCGATGACAACGATGCTGCTCCATATTCTTTATTTAGTGCTTGTTTGGTACCCGGATTTGATTGTCCCAACTGGATTCTTATACGTGGTTTTGATTGGGATATGGTATTACCGGTTCAGGCCCAAGATACCAGCTGGTATGGATACCCGATTGTCACAAGCTGAAGCAGTTGACCCGGATGAGATTGATGAGGAGTTCGATACAATGCCAAGTTCCAAGCCACCTGATGTAATTCGGGTTCGTTATGACAGGTTAAGGTTGTTGGCTGCTAGGGTCCAAACGGTGTTGGGTGATTTTGCAACCCAAGGGGAAAGGGTTCAAGCCTTGGTGAGTTGGAGGGACCCCAGGGCTACCAAGTTGTTCATTGGAGTGTGTCTTGTCATCACTATCATTCTCTATGCTGTGCCGCCAAAAATGGTAGCAGTGGCCTTAGGATTCTATTACCTGCGCCACCCCATGTTCCGGAACCCAATGCCTCCGGCCAGCTTGAACTTTTTCCGACGACTTCCCAGCTTGTCTGATCGGTTGATGTAG 3057 0.545 MTTPFQQAPQTVRRLVVEVVDARNLLPKDGQGSSSPYVIADFDGQRKRTTTRFKELNPVWNETLEFIVSDPDNMEYEELEVEVYNDKKFGNGSGRKNHFLGRVKLYGSQFSAGGEEALVYYTLEKKSVFSWIRGEIGLKIYYYDELLQEDDRQQLPLPEEQQAVGTEQEKNRPPPGMTMAEEGRVFEVPGPIEHCVPEGPPHSPRVMVVEESPPPVVHVPQDPPLPEMCGPPESEMQYHPEVRKMQAVRAERVRILKKPNGDYLPKDISGKKTGVESERVHPYDLVEPMQYLFVRIVKARGLAPPCKSPFVKVRTSSHYVRSKPAIYRPNEPTDSPEWNQVFALGYNKTDAASATLEISLWDSPTESFLGGVCFDLSDVPVRDPPDSPLAPQWYRLEGGAADQNPGRVSGDIQLSVWIGTQSDDAFPEAWSSDAPYAAHSRSKVYQSPKLWYLRVTVIEAQDLNMAPNLPPLTAPEIRVKVQLGFQSQRTRRGCMNHHSMSFHWNEDILFVAGEPLEDSMILLVEDRTAKEAVLLGHVVIPLSSIEQRIDERYVPAKWFPLEGGSYCGRVYLRLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPAVGILELGILGARGLLPMKYKGPGKGSTDAYCVAKYGKKWVRTRTVTDSFDPRWNEQYTWQVYDPCTVLTVGVFDNWRMFADVSECKPDCSIGKVRIRVSTLESNKVYTSSYPLLVLTRTGLKKMGEIEMAVRFACPSLLPDTCAVYGQPLLPRMHYLRPLGVAQQEALRGAATKMVAQWLARSEPPLGHEVVRYMLDADSHSWSMRKSKANWFRIVAVLAWAVGLAKWLDEIRRWKNPMTTMLLHILYLVLVWYPDLIVPTGFLYVVLIGIWYYRFRPKIPAGMDTRLSQAEAVDPDEIDEEFDTMPSSKPPDVIRVRYDRLRLLAARVQTVLGDFATQGERVQALVSWRDPRATKLFIGVCLVITIILYAVPPKMVAVALGFYYLRHPMFRNPMPPASLNFFRRLPSLSDRLM* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03920 1018 Gene3D C2 domain 604 740 IPR035892 -
Rops2g03920 1018 CDD C2C_MCTP_PRT_plant 452 595 IPR047258 -
Rops2g03920 1018 ProSiteProfiles C2 domain profile. 1 120 IPR000008 -
Rops2g03920 1018 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 147 IPR035892 -
Rops2g03920 1018 CDD C2B_MCTP_PRT_plant 291 420 IPR047257 -
Rops2g03920 1018 ProSiteProfiles C2 domain profile. 273 394 IPR000008 -
Rops2g03920 1018 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 15 1018 IPR047259 -
Rops2g03920 1018 Pfam Plant phosphoribosyltransferase C-terminal 863 1018 IPR013583 -
Rops2g03920 1018 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 606 758 IPR035892 -
Rops2g03920 1018 Pfam C2 domain 291 394 IPR000008 -
Rops2g03920 1018 Pfam C2 domain 451 561 IPR000008 -
Rops2g03920 1018 Pfam C2 domain 14 109 IPR000008 -
Rops2g03920 1018 Pfam C2 domain 606 717 IPR000008 -
Rops2g03920 1018 Gene3D C2 domain 287 437 IPR035892 -
Rops2g03920 1018 Gene3D C2 domain 9 173 IPR035892 -
Rops2g03920 1018 FunFam C2 domain-containing protein 589 741 - -
Rops2g03920 1018 CDD C2A_MCTP_PRT_plant 14 144 - -
Rops2g03920 1018 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 291 436 IPR035892 -
Rops2g03920 1018 ProSiteProfiles C2 domain profile. 430 559 IPR000008 -
Rops2g03920 1018 FunFam C2 domain-containing protein 273 418 - -
Rops2g03920 1018 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 451 597 IPR035892 -
Rops2g03920 1018 ProSiteProfiles C2 domain profile. 589 715 IPR000008 -
Rops2g03920 1018 CDD C2D_MCTP_PRT_plant 607 734 IPR047255 -
Rops2g03920 1018 Gene3D C2 domain 438 578 IPR035892 -
Rops2g03920 1018 SMART C2_3c 452 554 IPR000008 -
Rops2g03920 1018 SMART C2_3c 14 119 IPR000008 -
Rops2g03920 1018 SMART C2_3c 607 714 IPR000008 -
Rops2g03920 1018 SMART C2_3c 291 388 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03920 Rops-Chr2 71768030 71771664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03920 2 1018 Lipid Metabolism Gene Families AT1G74720 71.745 0.0 1554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03920 - - gmx:100783882 1826.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03920 2 71768030 71771664 Rops2g03920 2 71768030 71771664 ECH