Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03908 ATGGAAAATCCTGCTCCTGCAAGCTTCTGGACTCAGACAAACGCTCTTCTTAGGAAGAATCTAACGTTTCAGAAACGGAACGTGAAGACGAACCTTCGGTTGATCCTGTTCCCGTTGATACTGTGCGTTTTGTTGGTTGTCCTTCAAGCTTTAATCGATCGTCAAATGGATAAGCCCGAATTCAAATGTGGCTGCGTTTGTGCCAATAATAAAACACAAGACGCTGCTGCTGAGTGCAATGATTCTGAGAAGGTTTGTGGGGTCCAGTATTCGGATTCGCGTCAAGCTGTAGCATGTGCCATTCCCCACCCACCTGAATGGCCTCCTCTCTTGCAGCTTCCGGCTCGACCCAACTGGACCAGTTTTCTTCCCTTATGCATGAGAACCGGCTCTTGTCCTTTTACCATGCTATTCACTGCCAATAATCACTCGTTTGCAGAAAGTGTGTCTGAGAATTTGTTCCCAAGTGAAATCACTATGAATGACTCTGATATAATGGCTAGTTTGGCAACAAATGTCCTGGGATCTGAATCATGGACGGAAAGAAACAATTTTCTTGAACCTGCTTTCTCTTCGGGTCTTCCCATTTATTATCTACAAACTCGGTGCCTGCAGAACTCTGGATTCTCCTTTCCCTTCCAGATAGCAGGCAATTCTGTGGAGCTAGAGTTCAGATGTGCTCAGGGCTTACATTCTTGGCGTAACAGTTCTTCTGAGATCAACAATGAGTTATATAAAGGTTATAAAGAAGGAAACCCAGATGGACAGATAAATGACATAGTGTCAGCTTTTGATTTTCTAAATTCAAATGAGAATAGATTTAATGTCAGCGTATGGTACAACTCAACCTTCAAGCGTGACACTGGATTTGGTCCAATTGCATTGTTGCGGATTCCTCGTTCTGTAAATATGATATCGAATGCCTACCTGCAGTTTCTTCTTGGACCCGGTATCAAAATGTTATTTGAGTTCGTAAAGGAAATGCCAAAATCTGAGACCCCAATTAGCATTGAGATAGCTTCTCTTCTTGGCAGTCTGTTCTTCACATGGGTCATCCTGCAACTTTTTCCTGTTGTTCTGACATCACTGGTATATGAGAAGCAACAAAAATTAAGAATCATGATGAAAATGCATGGTCTTGGTGATAAGCCATATTGGATTATTTCATATGGTTATTTTCTTGCCATATCAGTGATCTACATGTTCTGTTTTGTGGTGTTTGGCTCAGTCTTAGGATTAAAATTCTTCACATTGAATGACTACAGCATCCAATTTGTGTTTTATTTCATCTTTATAAACTTACAAATTTCACTGGCGTTTCTGGTGGCTTCCTTTTTTTCAAATGTCAATACTGCTACAGTAACTGCATATATAGGTGTCTTTGGAACTGGGCTATTAGCTGGATTTCTTTTCCAATTTTTTGTTCAAACTACATCAGTTCCAAGAGGGTGGATAATTTTTATGGAGTTGTATCCCGGGTTTTCTTTATATCGTGGGTTATATGAGTTTGCACAATTTTCCTGGATTGGGAGTAATTTGGGGACTGATGGTATGCGGTGGCAGGATCTAAATGATGGCCGCAATGGCATGAAAGAGGTCTTAATTATCATGTTTGCTGAGTGGATAGTAGTGCTTTTTGCTGCTTATTACATCGATCAAGTATTGTCATCAGGAAGCGGAAAACATCCCCTTTTCTTCTTGAAAGGATTTCAGAAAAAGGCTCCATCATCATTCCAGAAGCCCAGTATCCGAAGGCAGGGGTCAAAAGTTTTGGCTCAGATGGAGCAACCTGATGTCATCCAAGAGAGGGAGAAGGTGGAGCAGCTGCTACTTGAACCAACTATTAATCATGCAATTGTATGTGATGACCTAAAAAAAGTCTATCCAGGAAGGGATGGAAATCCAGAGAAATTTGCAGTGAGAGGGTTATTCCTTGCTGTGCCTCGAGGGGAATGCTTTGGTATGCTTGGTCCGAATGGTGCTGGGAAGACTTCTGCTATCAATATGATGATTGGGCTCACAAAGCCAACCTCTGGTACGGCATTTGTTCAAGGCCTGGACATAAGAACTCATATGGATGGAATATATACTAGCATGGGAGTATGCCCACAGCATGACTTGCTGTGGGAAAGCTTGACAGGTAGAGAGCACCTACTTTTTTATGGCAGACTTAAAAATCTTAGAGGTTCAGTCTTGACACAAGCAGTAGAAGAATCTTTGAAGAGTTTAAACCTTTTTCATGGAGGGGTTGCTGATAAACAAGCTGGAAAATACAGTGGAGGGATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGGAATCCCAGAGTTGTTTATATGGATGAGCCAAGTACCGGTTTAGACCCTGCTTCAAGGAAGAGCTTATGGAATGTTGTAAAGCTTGCAAAACGGGATCGTGCAATCATTCTGACCACACATTCCATGGAAGAGGCAGAGGCCTTGTGTGATCGATTAGGAATATTTGTAAATGGTAGCTTGCAGTGCGTAGGAAATCCAAAGGAGCTGAAAGCTAGATATGGAGGAACTTATGTGTTCACGATGACAACATCTTCTGATCATGAGAAGGATGTGGAGAGCATGGTACAACAGCTCACCCCAAATGCCATAAAGATATACCATCTCTCTGGTACCCAGAAGTTTGAGCTACCAAAAGATGAAGTTAGAATAGCGGATGTATTCCGAGCTGTAGAAGCTGCAAAGAGAAATTTCACTGTTTCTGCATGGGGTTTAGTTGACACCACATTGGAAGATGTGTTCATTAAGGTAGCACGTGGGGCTCAGGCATTTGATTCCTTGTCATAA 2826 0.4197 MENPAPASFWTQTNALLRKNLTFQKRNVKTNLRLILFPLILCVLLVVLQALIDRQMDKPEFKCGCVCANNKTQDAAAECNDSEKVCGVQYSDSRQAVACAIPHPPEWPPLLQLPARPNWTSFLPLCMRTGSCPFTMLFTANNHSFAESVSENLFPSEITMNDSDIMASLATNVLGSESWTERNNFLEPAFSSGLPIYYLQTRCLQNSGFSFPFQIAGNSVELEFRCAQGLHSWRNSSSEINNELYKGYKEGNPDGQINDIVSAFDFLNSNENRFNVSVWYNSTFKRDTGFGPIALLRIPRSVNMISNAYLQFLLGPGIKMLFEFVKEMPKSETPISIEIASLLGSLFFTWVILQLFPVVLTSLVYEKQQKLRIMMKMHGLGDKPYWIISYGYFLAISVIYMFCFVVFGSVLGLKFFTLNDYSIQFVFYFIFINLQISLAFLVASFFSNVNTATVTAYIGVFGTGLLAGFLFQFFVQTTSVPRGWIIFMELYPGFSLYRGLYEFAQFSWIGSNLGTDGMRWQDLNDGRNGMKEVLIIMFAEWIVVLFAAYYIDQVLSSGSGKHPLFFLKGFQKKAPSSFQKPSIRRQGSKVLAQMEQPDVIQEREKVEQLLLEPTINHAIVCDDLKKVYPGRDGNPEKFAVRGLFLAVPRGECFGMLGPNGAGKTSAINMMIGLTKPTSGTAFVQGLDIRTHMDGIYTSMGVCPQHDLLWESLTGREHLLFYGRLKNLRGSVLTQAVEESLKSLNLFHGGVADKQAGKYSGGMKRRLSVAISLIGNPRVVYMDEPSTGLDPASRKSLWNVVKLAKRDRAIILTTHSMEEAEALCDRLGIFVNGSLQCVGNPKELKARYGGTYVFTMTTSSDHEKDVESMVQQLTPNAIKIYHLSGTQKFELPKDEVRIADVFRAVEAAKRNFTVSAWGLVDTTLEDVFIKVARGAQAFDSLS* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03908 941 FunFam ABC transporter A family member 7 608 884 - -
Rops2g03908 941 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 847 IPR027417 -
Rops2g03908 941 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 619 856 IPR003439 GO:0005524
Rops2g03908 941 CDD ABC_subfamily_A 623 844 - -
Rops2g03908 941 Pfam ABC-2 family transporter protein 253 550 IPR013525 GO:0016020|GO:0140359
Rops2g03908 941 Gene3D - 611 883 IPR027417 -
Rops2g03908 941 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 590 935 IPR026082 GO:0016020|GO:0055085|GO:0140359
Rops2g03908 941 Pfam ABC transporter 645 785 IPR003439 GO:0005524
Rops2g03908 941 SMART AAA_5 649 833 IPR003593 GO:0016887
Rops2g03908 941 ProSitePatterns ABC transporters family signature. 758 772 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03908 Rops-Chr2 71630635 71645317 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03908 623 843 Calmodulin-binding Proteins AT2G36910 24.017 3.35e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03908 - - gmx:100792897 1469.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03908 2 71630635 71645317 Rops2g03908 2 71630635 71645317 ECH