Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03905 ATGATGCCTAAGGTATTCTTGTTGTTTTGTTTTCTCCTGGGGCTTCTGCTCCTTTCTCAGGCACATGAAAATCACAAGATTGAATTTTATGAACTGAAGAGAGGAAATTTCGAGCTGAATTTGACAAACTATGGTGCTACAATTGTCTCTGTCATAGTCCCTGATAAACACGGGAATTTAGCCGATGTTGTTCTTGGTTACGATTCCATTAATTCTTACGAGAATGATACCACTTACTTCGGTGCCCTTATTGGACGTGTGGCAAATAGAATTGGAAGAGCTAAATTCACTTTGGAAGGCAAAACCTACAACTTGCCTGCTAATGATCACGGGAACACTCTCCACGGTGGTACCAGAGGGTTCAGTGATGTTGTATGGACAGTAAAATCTCACCAGAAAGATAGTCATATAACACTTACCTACCACAGTTTTGATAATGAACAAGGCTTTCCTGGACAACTTGAGGTCTCGGTGACTTACATGTTCATTGGAACAAACAAATTGGGAGTGAGAATGATTTCCAAACCGTTAGACAAAGCCACACCAGTGAATCTAGCACAACATACTTACTGGAACCTGAGGGGCCACAACAGTGGTGACATTCTCTCTCACATTGTTCAGATCTTTGGCTCACAGATCACACCAGTGGACAAGGATCTCATCCCCACAGGCAAACTCCAATCTGTAAAGAACACTCCATATGATTTTCTTGAACCAAAAAAAGTTGGAAGTCAGATTAATGAGCTTCCTGGTCTATATGACATAAACTATGTGCTTGACAAAAGTGGCCAAGAGCACTTAAGTAAGGTGGCTGTGGTGAGAGATCCTGTCTCTGGGAGGAAAATGGAGCTATGGTCAAACCAACTTGGTCTTCAGTTCTATACTAGTGGCATGTTGAATGATACCAAGGGCAAGGATGGTGCCATATACCCCAAGCATGCTGGCATTGCCTTGGAGACACAGGGTTTCCCAGATTCTGTGAATTACCCTAACTTCCCATCCCAGATTGTGCACCCCGGGCAATTATACAAGCACTACATGGTTTATAGATTCACAGCTAGCTAA 1065 0.4272 MMPKVFLLFCFLLGLLLLSQAHENHKIEFYELKRGNFELNLTNYGATIVSVIVPDKHGNLADVVLGYDSINSYENDTTYFGALIGRVANRIGRAKFTLEGKTYNLPANDHGNTLHGGTRGFSDVVWTVKSHQKDSHITLTYHSFDNEQGFPGQLEVSVTYMFIGTNKLGVRMISKPLDKATPVNLAQHTYWNLRGHNSGDILSHIVQIFGSQITPVDKDLIPTGKLQSVKNTPYDFLEPKKVGSQINELPGLYDINYVLDKSGQEHLSKVAVVRDPVSGRKMELWSNQLGLQFYTSGMLNDTKGKDGAIYPKHAGIALETQGFPDSVNYPNFPSQIVHPGQLYKHYMVYRFTAS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03905 354 CDD galactose_mutarotase_like 30 351 IPR047215 GO:0016853
Rops2g03905 354 Pfam Aldose 1-epimerase 30 350 IPR008183 GO:0005975|GO:0016853
Rops2g03905 354 PANTHER ALDOSE-1-EPIMERASE 26 352 - -
Rops2g03905 354 PIRSF GALM 17 354 IPR015443 GO:0016853|GO:0019318
Rops2g03905 354 SUPERFAMILY Galactose mutarotase-like 19 351 IPR011013 GO:0003824|GO:0005975|GO:0030246
Rops2g03905 354 FunFam Aldose 1-epimerase 18 353 - -
Rops2g03905 354 Gene3D - 17 353 IPR014718 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03905 Rops-Chr2 71561467 71563136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03905 12 353 Miscellaneous Gene Families AT3G47800 59.064 4.27e-152 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03905 K01785 - gmx:100806956 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03905 2 71561467 71563136 Rops2g03905 2 71561467 71563136 ECH