Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03883 ATGAACTCCATTGCCCTCAAATCCTTCGTCGGGCTCCGGCAGTCTTCGCCGGAAACCCCCCATTTCTCGGCCCAGCCAAAATCCCTCACTCCCCATCGGAAGCTCAAGGTCATCGCCGGGAAATTCAGCCCCAAGATACAGGGTCGGAACCTCCGCGTGGCAGTGGTTGGCGGAGGCCCGGCCGGCGGGGCTGCGGCGGAGACACTGACAAAGGGAGGCATCGAGACGTTCCTCATCGAACGGAAAATGGACAACTGCAAGCCATGCGGCGGAGCCATTCCACTTTGCATGGTGGGAGAGTTCGACCTTCCATTGGACATCATAGACCGCCGTGTCACAAAGATGAAAATGATATCGCCGTCGAACGTCGCCGTTGACATTGGACGGACCCTTAAGCCTCATGAGTACATCGGCATGGTTCGGCGTGAGGTGCTTGATTCTTACCTCAGGGACCGGGCAAAGCAAAACGGGGCGAATATCATAAACGGGTTGTTCTTGAAAATGGATATGCCTAGAGATAACAGCTCCCCCTACGTGCTTCATTACTCTTCCTACGACGGCAAATCCGGTGGGGTCGGTGAAAAGTGCACCTTGGAAGTTGATGCTGTCATTGGTGCTGATGGGGCTAATTCTAGAGTTGCCAAGTCTATTGATGCTGGTGATTATGACTATGCCATTGCATTTCAGGAGAGGATAAAAATTCCGGATGATAAAATGGTTTATTACGAGGATCTTGCGGAGATGTATGTGGGTGATGATGTTTCACCGGATTTCTATGGTTGGGTGTTTCCAAAATGTGATCATGTGGCTGTTGGCACTGGCACTGTGACACACAAGGGAGACATCAAGAAATTCCAACTAGCAACTAGGAAAAGAGCTGCGGACAAGATCTTGGGGGGTAAGATCATCCGAGTGGAGGCACATCCTATTCCGGAACATCCAAGGCCAAGAAGATTGTCAGGGAGAGTGGCACTGGTTGGTGATGCTGCTGGCTATGTCACCAAATGTTCTGGAGAAGGAATCTATTTTGCAGCCAAGAGTGGGAGGATGTGTGCAGAGGCAATTGTTGAAGGTTCAGAGAATGGGAAGAGGATGGTGGAAGAAGGGGACTTGAGGAAGTACTTGGAGAAGTGGGATAAGACTTATTGGCCCACTTACAAGGTCTTGGATGTGCTTCAGAAGGTGTTTTATAGGTCCAATCCTGCCAGGGAAGCTTTTGTGGAGATGTGTGCTGATGAATATGTGCAAAAGATGACCTTTGATAGCTATTTGTACAAGACAGTGGTACCTGGCAATCCATTGGAGGATCTCAAGTTGGCTATTAACACCATTGGGAGCTTAGTGAGGGCCAATGCTATAAGGAGGGAGATGGACAAACTTAATGTATGA 1389 0.4989 MNSIALKSFVGLRQSSPETPHFSAQPKSLTPHRKLKVIAGKFSPKIQGRNLRVAVVGGGPAGGAAAETLTKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMISPSNVAVDIGRTLKPHEYIGMVRREVLDSYLRDRAKQNGANIINGLFLKMDMPRDNSSPYVLHYSSYDGKSGGVGEKCTLEVDAVIGADGANSRVAKSIDAGDYDYAIAFQERIKIPDDKMVYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRKRAADKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSENGKRMVEEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVVPGNPLEDLKLAINTIGSLVRANAIRREMDKLNV* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03883 462 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 52 74 - -
Rops2g03883 462 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 335 - -
Rops2g03883 462 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 199 214 - -
Rops2g03883 462 PANTHER GERANYLGERANYL DIPHOSPHATE REDUCTASE 49 455 - -
Rops2g03883 462 NCBIfam geranylgeranyl reductase 51 449 IPR011774 GO:0045550
Rops2g03883 462 NCBIfam geranylgeranyl diphosphate reductase 52 449 IPR010253 GO:0015979|GO:0015995|GO:0045550
Rops2g03883 462 NCBIfam geranylgeranyl reductase family protein 53 355 IPR011777 GO:0016628
Rops2g03883 462 Gene3D - 50 461 IPR036188 -
Rops2g03883 462 FunFam Geranylgeranyl diphosphate reductase 50 457 - -
Rops2g03883 462 Pfam FAD binding domain 52 84 IPR002938 GO:0071949
Rops2g03883 462 SUPERFAMILY FAD/NAD(P)-binding domain 51 433 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03883 Rops-Chr2 71208755 71210891 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03883 K10960 - gmx:100814603 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03883 2 71208755 71210891 Rops2g03883 2 71208755 71210891 ECH