Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03870 ATGGGTCCTCAAAATGAAGATCGATCAGAGATTGTGTTCTTCGACGTGGAGACAACGGTCCCGACCCGACCCGGCCAGGGTTTTACGATTCTTGAATTCGGAGCCATACTTGTCTGCCCTAGAAAGCTGACGGAGCTCAGAAATTACTCCACTTTGGTCCGACCCGCCAACCTATCTCTCATTTCGCCTTTGTCGGAGCGCTGCAACGGCATCACCGCTGATGCCGTTTCATCTGCCCCTACTTTCGCCGACATAGCTCATTTCGTTTATGACCTTCTTCACGGGCGGATTTGGGCGGGTCACAATATCATAAGATTTGACTGTGTTCGGATCAGAGATGCATTTGCTGAGATTAACCAGGCGCCACCGGAACCTAAGGGTACTATTGACTCTTTGGTTTTGTTGACTCAAAAGTTTGGAAGAAGAGCTGGTGACATGAAGATGGCTACTCTAGCTACCTATTTTGGGCTTGGACGGCAGACACATAGGAGCTTGGATGATGTTCGGATGAATCTTGAAGTACTCAAATACTGTGCAACAGTTCTGTTTCTGGAGTCAAGTCTCCCAGATATATTCACTGCAAATAGTTGGGTTTCACCAAATGCTATTACAAGAAGTCGTAGTAATGGGAAATCTCGACCAGAAGGGGGCTTATTAAATATGAACAAGGATTCTATATTGTTATCATCTCCTGAGACAGAAACTAATGATAAAAATCATCCAATACTTTCTCTTGCAATGAGCAGCACAAAAGGGGCTGTCCCAAATATTACACATCCTAATCCAGCTCAACCGGATACTTTTAACTTTCGCGATCTTCAGAATGAAATACAAAGAGAATCCATTCAGACAGATGTTGCCATGGATGACAAGCCCATGCAAGCATCTGATATGTCTTCCTCATCTTCTGTGGCTCAGTCTGGCAGCAGCTCCATTGTTGTTTTAGAACCTGACGAAATATGTATCCCTTCTATTGATGCATGTCTTGTTCCATCTTATTATGGCAGTCAAAGGATAGAATTAATTCACGAAGGTTTCCCCTTTCATCTTCATTGTACTGGTTTGAAAGTGCGGTTTGGAATTAGCACAAAGTTTGTTGATAGTGCTGGCCGGCCACGGTTGAGTTTTGTGGTTGATCCATCAGCAAGTTTATGTAATGTTCTTGATGCATGTGACCGTGTTGCACAGAAGTTATCCTCGGATTCTGGAAGCAGCTCTGATTGGAGGCCAGTTGTTAGTAGAAAAGATGGTTTCTTCAACTATCCTACCATCAGATTACATATACCTACAGCAGTGTTCGGAGGCCTTGCTATTTATGCCACAGAACTATACCAAAGAGAATCATCTGGTGCTGTGCAAAGACTTCTCTTCAGTAAGTCTGATGCTGAAGAACTTGGCTCCTTGTTCAAGCCTGGGACGTTTGTTGATGCATTCTTCTCCTTGGATCTGTATGATTATCAGCAGAATGCAGGGATTAAATTAGTTGCCAAAAAATTGATCATCGATTCCAAGTAG 1515 0.4363 MGPQNEDRSEIVFFDVETTVPTRPGQGFTILEFGAILVCPRKLTELRNYSTLVRPANLSLISPLSERCNGITADAVSSAPTFADIAHFVYDLLHGRIWAGHNIIRFDCVRIRDAFAEINQAPPEPKGTIDSLVLLTQKFGRRAGDMKMATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTANSWVSPNAITRSRSNGKSRPEGGLLNMNKDSILLSSPETETNDKNHPILSLAMSSTKGAVPNITHPNPAQPDTFNFRDLQNEIQRESIQTDVAMDDKPMQASDMSSSSSVAQSGSSSIVVLEPDEICIPSIDACLVPSYYGSQRIELIHEGFPFHLHCTGLKVRFGISTKFVDSAGRPRLSFVVDPSASLCNVLDACDRVAQKLSSDSGSSSDWRPVVSRKDGFFNYPTIRLHIPTAVFGGLAIYATELYQRESSGAVQRLLFSKSDAEELGSLFKPGTFVDAFFSLDLYDYQQNAGIKLVAKKLIIDSK* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03870 504 SMART exoiiiendus 10 184 IPR013520 -
Rops2g03870 504 FunFam Exonuclease family protein 4 182 - -
Rops2g03870 504 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 7 493 - -
Rops2g03870 504 Pfam Exonuclease 12 175 IPR013520 -
Rops2g03870 504 Gene3D - 4 182 IPR036397 GO:0003676
Rops2g03870 504 SUPERFAMILY Ribonuclease H-like 9 180 IPR012337 -
Rops2g03870 504 CDD DEDDh 12 176 - -
Rops2g03870 504 MobiDBLite consensus disorder prediction 285 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03870 Rops-Chr2 71013582 71017493 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03870 - - ccaj:109808157 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03870 2 71013582 71017493 Rops2g03870 2 71013582 71017493 ECH