Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03865 ATGGGGCAAGAGAATCACAAGAGAAACAGCAACACGGGTTTACCCACCTCCACCAACAGAAACCGCCGTGGCCGTCAGATCCAGAAAACCTTCAACAACGTGAAGATCACAATCCTCTGCGGCTTCGTCACCATCCTCGTCCTACGTGGCACCATCGGCGTCAACCTCGGTTCCTCCGACGCCGACGCTGTCAACCAAAACCTCATCGAAGAAACCAACCGCATCCTCGCCGAGATCCGATCCGACGCCGATCCCTCAGATCCCGACGCCGTCACTTTTCACAACCCTAATGTCACCTTCACCTTGGGACCCAAGATCACAAATTGGGACCGTGAACGCAAAACATGGCTCGATCAAAACCCTGAATACCCTAATCACATCAAAGGTAAAGCTCGAATCTTGCTCCTAACTGGGTCACCCCCGAAGCCCTGTGACAACCCAATTGGGGATCATTACTTGTTGAAGTCAATTAAAAACAAGATTGATTATTGTAGATTACATGGGATTGAAATTGTTTATAATTTGGCTCATTTGGATGTTGAGCTTGCTGGGTATTGGGCTAAATTGCCTATGATTAGGAGGTTGATGTTGTCACACCCTGAGGTGGAGTGGATTTGGTGGATGGATAGTGATGCTTTTTTCACTGATATGGTTTTTGAGCTTCCTTTGTCCAAGTATGATGGGTATAATTTGGTTCTTCATGGGTACCCTGATTTGTTGTTTGAGCAAAAGTCTTGGATTGCTGTGAATACTGGGAGTTTTCTCTTTAGGAATTGTCAGTGGTCTTTGGATTTGCTTGATGATTGGGCTCCTATGGGTCCTAAGGGTCCGATTCGTGAAGAGGCCGGGAAGATCTTGACTGCTAACCTCAAGGGTAGACCTGCATTTGAAGCTGATGATCAATCTGCATTGATATATTTGTTGCTGTCTAAGAAGGAGAAGTGGATGGATAAGGTGTTTCTTGAGAATTCATATTACTTGCATGGATACTGGGCTGGTTTGGTTGATAGGTATGAAGAGATGATTGAGAAGTATCATCCAGGGTTAGGAGATGAGAGATGGCCATTTGTAACACATTTTGTGGGGTGTAAACCATGTGGAAGCTATGGAGATTATCCTGTTGAGAGGTGCCTCAGTAGCATGGAGAGGGCTTTCAATTTTGCTGATAATCAGGTGCTCAAGCTCTATGGATTCAGGCATCGCGGCCTGTTGAGTCCTAAGATCAAGAGAATCAGAAATGAGACAGTTACTCCTTTGGAGTTTGTAGACCAGTTTGATATTCGAAGACATTCTACAGAAAACAGTGAATCAAAAAGCTAG 1320 0.4523 MGQENHKRNSNTGLPTSTNRNRRGRQIQKTFNNVKITILCGFVTILVLRGTIGVNLGSSDADAVNQNLIEETNRILAEIRSDADPSDPDAVTFHNPNVTFTLGPKITNWDRERKTWLDQNPEYPNHIKGKARILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNLAHLDVELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPLSKYDGYNLVLHGYPDLLFEQKSWIAVNTGSFLFRNCQWSLDLLDDWAPMGPKGPIREEAGKILTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSYYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEFVDQFDIRRHSTENSESKS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03865 439 FunFam xyloglucan 6-xylosyltransferase 2 129 280 - -
Rops2g03865 439 MobiDBLite consensus disorder prediction 1 26 - -
Rops2g03865 439 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 130 275 IPR029044 -
Rops2g03865 439 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 11 424 IPR008630 GO:0016020|GO:0016757
Rops2g03865 439 Pfam galactosyl transferase GMA12/MNN10 family 130 368 IPR008630 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03865 Rops-Chr2 70988983 70990749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03865 23 439 Glycosyltransferase AT5G07720 82.423 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03865 K08238 - gmx:100793238 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03865 2 70988983 70990749 Rops2g03865 2 70988983 70990749 ECH