Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03841 ATGTTTGGTTCAAAGAAATCTCCTTTGAAAATTGCTAAATCTAGCTCTGTTGAACCTGTCAATCATGTTAAATATGGGTCGAACCCATTTGATTCTGATGATGAGGAAAAGTATAACAAAAAGTATAACTCCACAAGGAAGACTTCTTCAGAGCGTGCACTAGTTACACTAGAAGTTAATACCAACCCTTTTGACGATGTTGATGACAATAAGAAATCTTCATCATCTTCTTATGCCCTTCAATCAGCAGACCATAACAGGTATAAGAATAATTTTCGTGACTCTGGCGGATTAGAGAATCAATCAGTGCAAGAATTGGAGAATTATGCTGTTTACAAGGCTGAAGAGACTACAAAATCAGTCAACAATTGTTTGAAGATAGCAGAGAACATAAGAGAGGATGCTACCAAGACATTAGTCACCCTTCATCAACAGGGTGAACAAATCACCAGGAGTCACGATGTTGCTGCTGACATTGATCGTGATCTAAGTCGGGGAGAAAAGCTTTTGGGAAGCCTTGGTGGCCTCTTCTCCAAAACTTGGAAACCAAAGAAGACACGTGCAATAAGGGGCCCTGTTATTGTTGGAGATGATCCGGTCAGAAGAAAGGGCAACCACTTGGAGCAGAGAGAGAAGTTAGGATTGACTTCTGCACCCAAAGGGCAGTCCAAGCTGCGGACCCCACCTCAAGAACCAACAGCTGCACTTGAAAAAGTTGAGTTTGAAAAGGGGAAGCAGGATGATGCACTATCAAATTTAAGTGATCTATTGGGAGAGCTTAAAGAGATGGCTGTTGACATGGGATCTGAAATTGAGAGGCATAACAAAGCCCTGAATCATATGGACGATGATGTGGACGAGTTGAATTTCAGAATGAAAGGTGCTAATCAACGAGGCCGTCGTTTACTTGGAAAATAA 918 0.415 MFGSKKSPLKIAKSSSVEPVNHVKYGSNPFDSDDEEKYNKKYNSTRKTSSERALVTLEVNTNPFDDVDDNKKSSSSSYALQSADHNRYKNNFRDSGGLENQSVQELENYAVYKAEETTKSVNNCLKIAENIREDATKTLVTLHQQGEQITRSHDVAADIDRDLSRGEKLLGSLGGLFSKTWKPKKTRAIRGPVIVGDDPVRRKGNHLEQREKLGLTSAPKGQSKLRTPPQEPTAALEKVEFEKGKQDDALSNLSDLLGELKEMAVDMGSEIERHNKALNHMDDDVDELNFRMKGANQRGRRLLGK* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03841 305 SMART tSNARE_6 106 173 IPR000727 -
Rops2g03841 305 SMART tSNARE_6 235 302 IPR000727 -
Rops2g03841 305 SUPERFAMILY SNARE fusion complex 101 171 - -
Rops2g03841 305 CDD SNARE_Qc 245 301 - -
Rops2g03841 305 CDD SNARE_SNAP25N_23N_29N_SEC9N 108 172 IPR044766 GO:0005484|GO:0031201
Rops2g03841 305 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 245 302 IPR000727 -
Rops2g03841 305 Gene3D - 238 304 - -
Rops2g03841 305 FunFam SNAP25 homologous protein SNAP33 97 174 - -
Rops2g03841 305 MobiDBLite consensus disorder prediction 195 233 - -
Rops2g03841 305 MobiDBLite consensus disorder prediction 196 210 - -
Rops2g03841 305 SUPERFAMILY SNARE fusion complex 244 303 - -
Rops2g03841 305 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 27 305 - -
Rops2g03841 305 MobiDBLite consensus disorder prediction 28 47 - -
Rops2g03841 305 Gene3D - 97 174 - -
Rops2g03841 305 FunFam SNAP25 homologous protein SNAP33 237 304 - -
Rops2g03841 305 MobiDBLite consensus disorder prediction 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03841 Rops-Chr2 70687948 70691142 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03841 K18211 - gmx:100809874 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03841 2 70687948 70691142 Rops2g03841 2 70687948 70691142 ECH