Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03823 ATGTGTAAACACCACACACCCGACGATGATTACCATCCCGAAAACCCAAATCGCATTAGGGCTATTTGGAACAAACTCCAATCCGCTGGCATTCCTGACCGATGTGTGATTTTGGATGCTAAAGAAGCTGAAGACAAATATTTACTGTCAGTGCATTCCAAAAATCATGTGAACTTGATTAAGAACATCAGCTCAAAACAATTTGATTCGCGGAGGCATAAGATTGCGTCAAAATTGAATTCTATATATTTTAATGAAGGTTCATCAGAAGCTGCTTATCTTGCTGCTGGCTCTGCTGTGGAGGTTGTTGAAAGAGTGGCAAGCAGGGAATTGCATTCTGCTGTTGCTATTGTCAGGCCTCCAGGTCATCATGCAGAAAAAAATGAAGCCATGGGATTTTGTCTGTTCAACAATGTAGCAATTGCTGCACGTTATCTCTTAGATGAAAGACCAGAATTAGGAGTAAAGAAAATTTTAATTGTTGACTGGGATGTCCATCATGGAAATGGTACTCAGAAAATGTTCTGGAATGATTCTCGAGTTTTATTCTTCTCCGTTCACAGGCATGAATTTGGGAGTTTTTATCCAGCTAATGATGATGGCTTTTACTTCATGATTGGGGAAGGAGCAGGTGCTGGATATAATATAAATGTGCCATGGGAAAATGGGAGATGCGGTGACGCAGACTACTTTGCGGTGTGGGAGCACATCTTGCTCCCTGTTGCCAAAGAATTTAATCCAGACATAGTTATAGTTTCTGCTGGATTTGATGCAGCTGTTGGTGACCCTCTGGGAGGATGTCGTGTCACACCATTTGGTTATTCTGTTCTGTTGAAAAAGTTGATGAATTTTGCTGAAGGTAGGATTGTACTGATTTTAGAAGGAGGATATAATCTTGACTCCATTGCAAAATCAATGCATGCTTGTGTGGAAGTTTTGTTAGAAGACAAGCCTCTTATTGGATCCACAGAGGCCTATCCATTTGAGTCTACATGGCGTGTGATTCAAGTGGTTCGCCAGGAGTTGAGTCCCTTTTGGCCTACACTTGCATGTGAATTGCCACAAAAATTAATTTGTCAAATGGCACCACCACCACATACTCTTATCTCAAGCTCTGATTCTGAGGCTGAGGATGACAAGGGTCCAGTCAATTCAGAAAATCTTGCAGAGCTTCTTGAGGATGTCATACAGCCACTTTCCAAGCTGAAAGTTGATGCAGATGAAGAGACTGATGCTTCTAGTTCTTGGCGATCAGAATTGTCAAATGTTTACATATGGTATGCCTCATTTGGATCAAATATGTGGAAATCAAGATTATATTGCTACCTTGCAGGTGGACAGGTGGAAGGTATGCAGAAGCACTGTTCTGGTTCAGTGAACAAAACTCTTCCAAAGGAGATCCTGTGGAAGACTTTCCCTTGCCATATATTTTTCGGTCGCGATTCCTCTCATTCATGGGGTCCTGGAGGGGTTGCGTTTCTTAATCCTGAGAAAAACTTGCAGCACAACACCTACATGTGCCTGTACAAAATTTCGCTAGAGCAGTTCAATGATATTTTATTTCAGGAAAATGGTTTAAGCCTTGATGCAGGTTCTCCTTTTTTTGATACAACTACCCTGAATGCTATCTCTGACAAGGAGTTCAATTCTCACGAGGTTGTGAAGGGTGGTTGGTATGGTAATGTTGTCTACTTAGGAAAGGAGCGAGATATTCCAATAATTACCATGACGTGTTCGCTTCTTGATATTGAACGCTTCAAATCTGGGAAGCTACCATTACGTACCCCTAATAAAGAGTACGCCAACACCTTAATTAAAGGGCTGGTAGAGGGAGAACAGCTTTCAGAGGTGGAAGCCATTGCTTACATAGAAGCTGCTGCTAAATCACTATAA 1893 0.4163 MCKHHTPDDDYHPENPNRIRAIWNKLQSAGIPDRCVILDAKEAEDKYLLSVHSKNHVNLIKNISSKQFDSRRHKIASKLNSIYFNEGSSEAAYLAAGSAVEVVERVASRELHSAVAIVRPPGHHAEKNEAMGFCLFNNVAIAARYLLDERPELGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHEFGSFYPANDDGFYFMIGEGAGAGYNINVPWENGRCGDADYFAVWEHILLPVAKEFNPDIVIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLMNFAEGRIVLILEGGYNLDSIAKSMHACVEVLLEDKPLIGSTEAYPFESTWRVIQVVRQELSPFWPTLACELPQKLICQMAPPPHTLISSSDSEAEDDKGPVNSENLAELLEDVIQPLSKLKVDADEETDASSSWRSELSNVYIWYASFGSNMWKSRLYCYLAGGQVEGMQKHCSGSVNKTLPKEILWKTFPCHIFFGRDSSHSWGPGGVAFLNPEKNLQHNTYMCLYKISLEQFNDILFQENGLSLDAGSPFFDTTTLNAISDKEFNSHEVVKGGWYGNVVYLGKERDIPIITMTCSLLDIERFKSGKLPLRTPNKEYANTLIKGLVEGEQLSEVEAIAYIEAAAKSL* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03823 630 Gene3D - 413 629 - -
Rops2g03823 630 PRINTS Histone deacetylase superfamily signature 247 257 IPR000286 -
Rops2g03823 630 PRINTS Histone deacetylase superfamily signature 120 143 IPR000286 -
Rops2g03823 630 PANTHER HISTONE DEACETYLASE 9-RELATED 1 369 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
Rops2g03823 630 Pfam Histone deacetylase domain 12 312 IPR023801 -
Rops2g03823 630 Gene3D Histone deacetylase domain 1 362 IPR037138 -
Rops2g03823 630 FunFam Histone deacetylase 15 1 364 - -
Rops2g03823 630 SUPERFAMILY Arginase/deacetylase 4 342 IPR023696 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03823 Rops-Chr2 70444430 70453082 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03823 K11406 - gmx:100788831 1169.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03823 2 70444430 70453082 Rops2g03823 2 70444430 70453082 ECH