Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03813 ATGGCTTCCTCACCCAGTTTTGCACCTTTTGTATTTCTGTTGCTCATAATCGGGGGCACTGCAAGGCCTTTGTATCCGCTTCCTAGCAAAGGTGATAATGGAAGGAAACCTCTACAAACTTTTCGCCCATATAACATTGCACATCGAGGTTCAAATGGAGAGCTTCCTGAAGAAACTCGTCCTGCATACATGAGAGCTATTGAAGAAGGTGCAGACTTCATTGAAACTGATATCTTATCTTCCAAAGATGGTGTTCTTATATGTTTCCATGATGTTATCCTTGATGATACTACTGATATTGCAAAACACAAAGAGTTTGCTAATCGTAAAAGAACATATGACGTCCAAGGGGTCAACATGACTGGCTTTTTTACTGTTGATTTCACATTGAAGGAATTAAAGTCATTGAGGGTGAATCAGAGGTATAGCTTCAGGGATCAACAGTTCAATGGAAAATTTCAAATCATTACTTTTGAAGAGTTCATTTCCATAGCACTGGATGCATCCAGAGTCGTTGGAATATATCCAGAGATAAAAAATCCAGTATTTATCAATCAGCATGTGAAATGGTCAGATGGCAAACAATTTGAGGACAAGTTTGTGGAGACACTTCAGAAATATGGATTCAAGGGTTCGTACCTGTCAAAAGATTGGTTGAAACAACCTGTATTTATTCAGTCATTTGCTCCAACTTCGCTTGTGTATATATCAAATCAGACGGACTTGCCCAAGATTTTATTAATTGATGATATTACTATTCCAACACAAGACACTAATCAGTCATATTGGGAAATTACATCTGATCAATACCTAGACTACATAAAACAATATGTTGTGGGAATTGGACCTTGGAAGGACACCATAGTACCTGTGGTAAATAATTATGTGATGACTCCTACTAATCTTGTTGCCAGGGCACATGCTCATAACCTGCAGGTGCATCCATATACTTACAGAAATGAGAACCGATATTTGCATTTCAACTTTAGTCAAGATCCGTATGAGGAGTATAATTACTGGATCAACAAGATAGGAGTTGATGGTCTTTTTACAGACTTCACAGGTAGTCTTCATAATTTTCAGGAATGGACCTCCTCTCACGGTCTAGATGACAAGACTGCATCCAAGCTATTGCATAAAATTGCTTTGTTGGTATCCCCTTATAAATGA 1170 0.3812 MASSPSFAPFVFLLLIIGGTARPLYPLPSKGDNGRKPLQTFRPYNIAHRGSNGELPEETRPAYMRAIEEGADFIETDILSSKDGVLICFHDVILDDTTDIAKHKEFANRKRTYDVQGVNMTGFFTVDFTLKELKSLRVNQRYSFRDQQFNGKFQIITFEEFISIALDASRVVGIYPEIKNPVFINQHVKWSDGKQFEDKFVETLQKYGFKGSYLSKDWLKQPVFIQSFAPTSLVYISNQTDLPKILLIDDITIPTQDTNQSYWEITSDQYLDYIKQYVVGIGPWKDTIVPVVNNYVMTPTNLVARAHAHNLQVHPYTYRNENRYLHFNFSQDPYEEYNYWINKIGVDGLFTDFTGSLHNFQEWTSSHGLDDKTASKLLHKIALLVSPYK* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03813 389 Gene3D Phosphatidylinositol (PI) phosphodiesterase 41 360 IPR017946 GO:0006629|GO:0008081
Rops2g03813 389 ProSiteProfiles GP-PDE domain profile. 43 361 IPR030395 GO:0006629|GO:0008081
Rops2g03813 389 CDD GDPD_ScGlpQ1_like 43 354 - -
Rops2g03813 389 Pfam Glycerophosphoryl diester phosphodiesterase family 48 355 IPR030395 GO:0006629|GO:0008081
Rops2g03813 389 SUPERFAMILY PLC-like phosphodiesterases 43 359 IPR017946 GO:0006629|GO:0008081
Rops2g03813 389 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 39 370 - -
Rops2g03813 389 FunFam Glycerophosphodiester phosphodiesterase GDPD5 41 360 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03813 9 388 Acyl Lipid Metabolism Gene Families AT1G74210 75.131 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03813 K01126 - gmx:100778145 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03813 2 70387119 70392209 Rops2g03813 2 70387119 70392209 ECH